Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02459 ATGGTTTCTTCGCAAGGAAATGCTGATCAAAACGGTTCGACTGATAAAGAACAGCAGCAAGTGAGTCCTCAGAAGGAGATCGCGTTGTCACAAGAGGTTGATGATGCAGCTAAAAATGAATCATCGGATTCTGATGGCAATGCCATGGCGAATGAGTTGCCTCCGTCGCCAGACTCTTCGCCGCTCGAGACACATTCCCAGAGCCCAGGTACTCCTTCGAATGAATTGCCTCCGTCGCAGTCTAGTCAGCGCGCTTCCGCTGTAATACGCGAAAAGGTAACGTCAGATGGCTATAACTGGCGAAAGTATGGCCAGAAAAGCCTCAAGGCGGAAGGATTTAAAAGGTGCTATTACAAATGTTCGTATCCAAACTGCCCGGCGAAAAAGAAATTTGTGATGTCACCCGATGGAAACTTCGAAAATTACACTTACGCCGGTCAGCATAGTCATCCTATACCTCAATCGAACACCATACCATCGGTTGAACGTGTTCTTCCTGCTGTTGAACAAGGACCGCAGCAATCCTCTTTGGCCGACATGGAAGGTCAAGACAAATCATCGGTTGAGTGTGAATCTACGCCTCAACGGATCAGTCCTTTACGTTGCTGTCCACCTTCAAATGCTTCCGAAACTCCTGACTCAAAGCGGCAGAAGACAGACGACAATAACACTCATACCGTTGGAGTTGACATGTCAACTGGTGAATCTCGCTTCGTTGTTCATACTCCAAGTGCATCCGGAATCGTAGAAGATGGGTATCGCTGGCGCAAATACGGGCAAAAAAACGTTAAAGGGAATGAAAATCCAAGAAACTATTATCGATGCACGTCTCCTGGATGCCATGTCAAAAAGCATGTTGAAAAATCCTCTGAGAATCCAATAAATATCATAACTACATATGAGGGAGAACATGATCACGAACCCCCTACTGCAAGACGCGTTCCTTGTAATACAAGCAAGCCGAAAAACAAATCTGGAGGCGATAGTGTTTGTGTCGCTATAGTTCCGTTTCAAGCGGTCGTGTTTCCTAACGATGTTCTTGAAAATAATTTATCCGAGGAAGAGCAACAAAATGAAAACCCTACTACCAAAGACGATCCCGAAGAAGAGCAACAAAATGAAGACGCTGGTACCAAAGACGATCCTGTCAGCAACAATGCCGTGATATCCGAGCCAAGTGCCGAAGTTCCATGCACATCAAATGAACATGATACTGTTAAGGTTTCTGGCCATGATACTCCTAGTACTACATGTGAACTCAATAAGGTTCCTGAAGATGGAGCTAGTGATTGA 1293 0.4548 MVSSQGNADQNGSTDKEQQQVSPQKEIALSQEVDDAAKNESSDSDGNAMANELPPSPDSSPLETHSQSPGTPSNELPPSQSSQRASAVIREKVTSDGYNWRKYGQKSLKAEGFKRCYYKCSYPNCPAKKKFVMSPDGNFENYTYAGQHSHPIPQSNTIPSVERVLPAVEQGPQQSSLADMEGQDKSSVECESTPQRISPLRCCPPSNASETPDSKRQKTDDNNTHTVGVDMSTGESRFVVHTPSASGIVEDGYRWRKYGQKNVKGNENPRNYYRCTSPGCHVKKHVEKSSENPINIITTYEGEHDHEPPTARRVPCNTSKPKNKSGGDSVCVAIVPFQAVVFPNDVLENNLSEEEQQNENPTTKDDPEEEQQNEDAGTKDDPVSNNAVISEPSAEVPCTSNEHDTVKVSGHDTPSTTCELNKVPEDGASD 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02459 430 MobiDBLite consensus disorder prediction 1 101 - -
Vivi7g02459 430 SMART WRKY_cls 249 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g02459 430 SMART WRKY_cls 94 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g02459 430 ProSiteProfiles WRKY domain profile. 89 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g02459 430 MobiDBLite consensus disorder prediction 1 27 - -
Vivi7g02459 430 MobiDBLite consensus disorder prediction 349 430 - -
Vivi7g02459 430 FunFam WRKY transcription factor 236 310 - -
Vivi7g02459 430 MobiDBLite consensus disorder prediction 170 229 - -
Vivi7g02459 430 Pfam WRKY DNA -binding domain 250 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g02459 430 Pfam WRKY DNA -binding domain 96 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g02459 430 SUPERFAMILY WRKY DNA-binding domain 243 309 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g02459 430 MobiDBLite consensus disorder prediction 378 422 - -
Vivi7g02459 430 Gene3D WRKY domain 234 310 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g02459 430 Gene3D WRKY domain 80 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g02459 430 MobiDBLite consensus disorder prediction 300 328 - -
Vivi7g02459 430 ProSiteProfiles WRKY domain profile. 244 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g02459 430 MobiDBLite consensus disorder prediction 170 212 - -
Vivi7g02459 430 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 25 364 IPR044810 GO:0003700
Vivi7g02459 430 MobiDBLite consensus disorder prediction 42 89 - -
Vivi7g02459 430 SUPERFAMILY WRKY DNA-binding domain 90 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02459 Vivi-Chr7 88446965 88451536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02459 73 317 WRKY Transcription Factor Family AT2G04880 40.590 3.94e-58 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi7g02459 WRKY 1.5e-24 CL0274