Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02442 ATGTATATATATGGAAGCTACAGAAAGCACATCATCATTGAGAAAATGGAGAAAGTATCCGATGAGGAAGCTTTTCTTTTTGCTATGGAACTATCACTTGCTTCTTCTGTTCCAATGGTTCTAAAAACAGCATTGGAACTTGGAATCATTGAAATCATAGCCAAAGCTGGCCCTAATGCTTACCTTTCATCTTCTCAAATTGCGTCTCAAATTCCTTCTATAAAAAATCCAGATGCACCTTCTATGTTGGACCGTTTGTTGCGTCTTTTGGCCAGCTACAAAATACTTACTTGCTCCATCCAACAAGCTCATGGAGATTCTAATGAAGAAAGGTTGTATGGTCTTCACCCATTAGCTAAATACTTTGTCAAAAATAATAATAATGAAGAAGAAGAATATGGTGCCTCCATCATTTCCTTCTTTCTTATGGAACATGACCAGGACCTCCAAGACATGTGGTACCACTTAACAAATTCAGTTAAAGAGGGTGGCCTTCCCTTTAACAATGCTTTTGGAATGACTCTTTTTGAGTTTCATGGCACAAATCCAAGGTTTAACAACCTTTTCAACAAGGCCATGTCTGATTCCTCTAGTATCATAATGAAGAACATTCTCGACACATATTCAGGTTTTGAGGGTCTTGGATCTATTGTTGATGTTGGTGGTGGAATTGGAACTGTTACTAACATGATTGTCTCTAAATATCCCAATATTAAAGCCATTAATTTTGACTTGCCACATGTCATTAACGAAGCTCCATCTTATCCAGGTGTGGAGCATGTTGGTGGAGACATGTTTGTGAGTGTTCCAAAAGCTGATGCCATTTTCATGAAGTGGATATGTCATGATTGGAATGATGAGCAATGCTTGAAAATTTTGAAGAATTGTTATGATTCACTTCCTGTCCATGGGAAGGTGATAGTAGTTGAGTCGATAGTTCCAGTAGTTCCAAACTCAAACATGGCCTCAAAAAATGTGCTTCAAATGGATGTTATCATATTGTGTCAAAGCCCTAGTGGAAAAGAGAGAACACAGAAAGAGTTTGAGATTTTGGCTAAGGGAGCAGGATTCCAAGGTTTTCAAATTGCTTGTTGTTCTTTCAATATGTATGTTATGGAATTTCTTAAGAATGCTTAA 1137 0.3747 MYIYGSYRKHIIIEKMEKVSDEEAFLFAMELSLASSVPMVLKTALELGIIEIIAKAGPNAYLSSSQIASQIPSIKNPDAPSMLDRLLRLLASYKILTCSIQQAHGDSNEERLYGLHPLAKYFVKNNNNEEEEYGASIISFFLMEHDQDLQDMWYHLTNSVKEGGLPFNNAFGMTLFEFHGTNPRFNNLFNKAMSDSSSIIMKNILDTYSGFEGLGSIVDVGGGIGTVTNMIVSKYPNIKAINFDLPHVINEAPSYPGVEHVGGDMFVSVPKADAIFMKWICHDWNDEQCLKILKNCYDSLPVHGKVIVVESIVPVVPNSNMASKNVLQMDVIILCQSPSGKERTQKEFEILAKGAGFQGFQIACCSFNMYVMEFLKNA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02442 378 PANTHER O-METHYLTRANSFERASE 31 360 IPR016461 GO:0008168
Vivi7g02442 378 FunFam Caffeic acid 3-O-methyltransferase 8 122 - -
Vivi7g02442 378 PIRSF O-mtase 8 376 IPR016461 GO:0008168
Vivi7g02442 378 Gene3D Vaccinia Virus protein VP39 129 376 IPR029063 -
Vivi7g02442 378 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 376 IPR016461 GO:0008168
Vivi7g02442 378 FunFam Caffeic acid O-methyltransferase 129 376 - -
Vivi7g02442 378 SUPERFAMILY "Winged helix" DNA-binding domain 20 126 IPR036390 -
Vivi7g02442 378 Pfam O-methyltransferase domain 153 358 IPR001077 GO:0008171
Vivi7g02442 378 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 374 IPR029063 -
Vivi7g02442 378 Pfam Dimerisation domain 39 91 IPR012967 GO:0046983
Vivi7g02442 378 CDD AdoMet_MTases 217 309 - -
Vivi7g02442 378 Gene3D - 10 122 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02442 Vivi-Chr7 88306919 88308448 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02442 18 377 Monolignol Biosynthesis Gene Families AT5G54160 58.333 3.49e-159 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02442 K13066 - rcu:8282965 467.618