Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02421 ATGACAACAATTAATCCACAGAATGACTCAAACTTGGTTATTGACTCAGTCTCAGACCCTTTGAACTGGAATTCAGCTGCGAATTCACTCAAGGGTAGCCACTATGACGAAGTGAAACGCATGGTGGCAGAGTACAAGAAACCAGTTATCTGTCTTGGTGGGGTGGAGACACTAACTATATCTAAGGTTGCTGCTGTTGCTAACAGTAACTCACATGTTAAGGTTGAACTCTCAGAGTCTGCAAGAGGTGGCGTTGAAGCCAGCTGCGAGTGGATCGCGGAAAACATTGAAAAAGGCACTGCCATTTATGGTGTCACCACTGGCTTTGGTGCTGCCTCTCATAGAAGAACTCAACAAGGCTTAGCTCTTCAGAAGGAGATGGTTAGGTTTTTAAACTGTGCAATATTTGGGCGTGAAACTGAGTTGTCTCATACATTACCTCAGTCGGCAACAAGAGCAGCTATGCTTGTGAGGGTTAATACACTTCTTCAAGGCTATTCAGGCATTAGATTTGAAATCTTAGAAGCTATCACCAAACTTCTCAACAGTAATGTCACCCCAGTGTTGCCATTACGCGGTACAGTTACTGCTTCCGGTGATCTAATTCCTCTGTCCTACATCGCTGCATTGCTAACTGGTAGGCGAAATTCCAGAGCTGTTGGACCCTCAAAACAGCCCCTTAATGCCAAGGAAGCTTTCGGTTTAGCAGGTCTGGATTCCGGGTTCTTCGAGTTGAAGCCTAAGGAAGGCCTTGCTCTTGTGAATGGCACAGCCGTTGGATCTGGTGTCGCTTCTACGGTACTTTTTGAGGCAAATATATTAGCTTTGTTATCAGTAGTTCTATCAGCAGTTTTTACCGAAGTCATGCAAGGGAAGCCCGAGTTTACACATCATCTTATACACAAACTGAAGTTCCATCCGGGTCAAATCGAAGCTGCTGCTATCATGGAACACATTTTAGATGGAAGCTCTTATATAAAAAACGCGAAACTGCAGCAGCCAGATCCATTGCAGAAGCCTAAAAAAGATCGCTACGCTCTTGTAACTTCTCCGCAGTGGCTCGGTCCACAAATTGAAGTCATCCGGTTTTCAACCAAATCGATCGAACGAGAGATAAATTCAGTGAATGACAATCCTCTGATTGATGTCACAACGGATAAGGCACTGAATGGTGGTAATTTCCAAGGCACCCCAATTGGAGTTTCGATGGATAACACACGTCTAGCTATTGCTTCAATAGGAAAACTCATCTTTGCGCAGTTTACTGAGCTAGTCAATGACTTGTACAATAACGGGTTGCCATCAAATCTTTCTGCGGGTAGAAACCCGAGTCTTGATTACGGTTTTAAGGCTTCTGAAGTTGCCATGGCTGCATATTGTTCTGAACTTCAATATTTGGCAAATCCTGTAACAAGCCATGTGCAAAGTGCTGAGCAGCATAACCAGGATGTGAACTCTTTGGGGTTGATTTCTGCTTTGAAAACTGTCGAAGCCATTGAGTTATTGAAGCTCTTGTCTTCCACATATTTGGTTGCACTCTGTCAAGCTATTGACTTGAGGCATTTGGAGGAAATTCTTAAGAACAGTATCAGAAATACTGTAAGCAGAGTTGCAAAGAAGACATTAAACATAGATGAAGAAGAAGAAAGTAATCCATTTAGAAACAGTGAGGAAAATTTGCTCAAAGTGGTTGATAGAGAGTACGTATTCTCCTACATAGACGATCCCTTTAATGTTGCGTGCCCGTTGATGCCGAAACTAAAGCAAGTACTTTATGAACACGCACATATCAGTGCCATTGGTGATAAGAATGCGAGCTTGTTGATATTTGAGAAGATAGGAGCTTTTGAGGAGGAATTGAAGTCTCTGTTGCCAAAGGAAGTTGAAAATGCAAGGGTGGCATTTGAGAAGGGAAATCCAGAAATTCCAAACAGAATTAAGGAATGTAGGTCATATCCATTATACAAGTTTGTGAGGGAAGAATTAGGGATAAGGTTGTTGACAGGAGAAAAGGATGTCACACCAGATGAGGAATTTGAGAAAGTGTTTACAGCAATGTGTCAAGCAAAGATTATTGATCCAGTTTTGGAATGTCTTGCTGATTGGAAAGGAGTTCCAATTCCAATATAA 2130 0.4235 MTTINPQNDSNLVIDSVSDPLNWNSAANSLKGSHYDEVKRMVAEYKKPVICLGGVETLTISKVAAVANSNSHVKVELSESARGGVEASCEWIAENIEKGTAIYGVTTGFGAASHRRTQQGLALQKEMVRFLNCAIFGRETELSHTLPQSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNSNVTPVLPLRGTVTASGDLIPLSYIAALLTGRRNSRAVGPSKQPLNAKEAFGLAGLDSGFFELKPKEGLALVNGTAVGSGVASTVLFEANILALLSVVLSAVFTEVMQGKPEFTHHLIHKLKFHPGQIEAAAIMEHILDGSSYIKNAKLQQPDPLQKPKKDRYALVTSPQWLGPQIEVIRFSTKSIEREINSVNDNPLIDVTTDKALNGGNFQGTPIGVSMDNTRLAIASIGKLIFAQFTELVNDLYNNGLPSNLSAGRNPSLDYGFKASEVAMAAYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISALKTVEAIELLKLLSSTYLVALCQAIDLRHLEEILKNSIRNTVSRVAKKTLNIDEEEESNPFRNSEENLLKVVDREYVFSYIDDPFNVACPLMPKLKQVLYEHAHISAIGDKNASLLIFEKIGAFEEELKSLLPKEVENARVAFEKGNPEIPNRIKECRSYPLYKFVREELGIRLLTGEKDVTPDEEFEKVFTAMCQAKIIDPVLECLADWKGVPIPI 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02421 709 Gene3D - 523 644 IPR023144 -
Vivi7g02421 709 NCBIfam phenylalanine ammonia-lyase 19 699 IPR005922 GO:0005737|GO:0006559|GO:0016841
Vivi7g02421 709 Gene3D - 11 257 IPR024083 -
Vivi7g02421 709 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 193 209 IPR022313 GO:0016841
Vivi7g02421 709 PANTHER HISTIDINE AMMONIA-LYASE 16 709 IPR001106 -
Vivi7g02421 709 FunFam Phenylalanine ammonia-lyase 11 257 - -
Vivi7g02421 709 Gene3D Fumarase/aspartase (Central domain) 258 704 - -
Vivi7g02421 709 CDD PAL-HAL 56 520 IPR001106 -
Vivi7g02421 709 Pfam Aromatic amino acid lyase 58 522 IPR001106 -
Vivi7g02421 709 SUPERFAMILY L-aspartase-like 19 709 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02421 Vivi-Chr7 88116578 88119121 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02421 11 709 Monolignol Biosynthesis Gene Families AT2G37040 71.714 0.0 1054
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02421 K10775 - gmx:100787872 1182.55