Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02410 ATGGGTTGTTGCCAATCCTCTTTGTTTTCAAGAGTAAAAGAAACCGAAAACAATCCTCTAGAAAAACAACCGCAACAGCAACCACAACCCTACCAGCAATTTCACAGCACCGCCACCAACGAGACGGAGAAGGATTTTTCAGATCCTTCTTCGTTTACGTTCTCGGAATTTTCACTTTCCGACTTGAAATCAGCTACGAACAATTTCAGTTCGGAGTATATAGTTTCCGAGAGCGGCGAGAAGGCACCGAACTTGGTTTACAAAGGTAGGTTACAGAATCAGAAGCGGTGGATTGCTGTTAAGAAGTTCGGTAAAGCTGCTTGGCCGGATCCGAAGCAGTTCGTTGAAGAAGCTTCTGGTGTTGGGAAATTGCGTCATCCTAGGCTTGCTAATTTGATCGGTTATTGTTGCGATGGTGATGAGAGGTTGCTCGTTGCTGAGTTTATGCCTAATGATACTCTCGCTAAACACCTTTTTCACTGGGAAAATCAGACGATTGAGTGGGCCATGCGGTTGAGAGTTGCTCTTTATATTGCACAAGCTTTGCATTATTGTACTTCTGAGGGTCGTCCTTTGTATCATGATTTGAATGCTTATCGCGTTCTTTTTGATGAGGAAGGTGATCCGCGTCTTTCTTGTTTTGGATTAATGAAGAACAGTAGGGATGGAAAAAGTTATAGCACAAATCTTGCTTATACACCTCCTGAATATTTAAGAAATGGAAGGGTTACCCCTGAAAGTGTAATTTACAGCTTCGGAACTGTTCTTCTTGACCTACTGAGTGGAAAGCACATCCCTCCCAGTCATGGTAAAAACAACATGCTATTGATGGATTCTCATTTAGAGGGAAAATTTTCTACAGAAGAGGCAACAGTGGTGGTCAATCTTGCCTCTAAATGTTTGCAATATGAACCGCGAGAGCGGCCTAATACAAAGGATTTGGTCACAACACTTGCTCCATTGCACACTAAACCTGATGTTCGTTCTCACATCATGCTTGGAATTCCAAAGCAAGAGGAAGCTCCATCTACCCCACAACGTCCTCTTTCTGCAATGGGTGAGGCTTGCTCAAGAATGGACCTCACTGCAATACATCAGATCTTAGTCGCAACGCACTATAGAGACGATGAAGGGACTAATGAGCTGTCGTTCCAAGAGTGGACTCAACAGATGAGAGATATGCTTGAGGCAAGGAAACGTGGGGACTATGCATTCCGTGATAAGGATTTTAAGACAGCTATTGATAACTATTCCCAGTTCATTGATGTGGGAACGATGGTCTCACCCACAGTTTTTGCAAGGCGAAGTCTATGCTATCTGTTATGTGATCAACCAGATCCTGCTCTACGAGATGCAATGCAAGCACAATGCGTTTATCCAGACTGGCCCACGACTTTCTACATTCAGTCGGTTGCTCTTGCAAAGCTGAACATGCACAAGGATGCAGCTGACATGTTAAATGAGGCAGCTGCATTGGAAGAAAAGAGGCAACGAGGTGCTAGAGGATCATAG 1512 0.4398 MGCCQSSLFSRVKETENNPLEKQPQQQPQPYQQFHSTATNETEKDFSDPSSFTFSEFSLSDLKSATNNFSSEYIVSESGEKAPNLVYKGRLQNQKRWIAVKKFGKAAWPDPKQFVEEASGVGKLRHPRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVALYIAQALHYCTSEGRPLYHDLNAYRVLFDEEGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHGKNNMLLMDSHLEGKFSTEEATVVVNLASKCLQYEPRERPNTKDLVTTLAPLHTKPDVRSHIMLGIPKQEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTTFYIQSVALAKLNMHKDAADMLNEAAALEEKRQRGARGS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02410 503 MobiDBLite consensus disorder prediction 1 49 - -
Vivi7g02410 503 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 26 498 IPR045845 GO:0004672|GO:0009742
Vivi7g02410 503 Gene3D Tetratricopeptide repeat domain 392 501 IPR011990 GO:0005515
Vivi7g02410 503 ProSiteProfiles Protein kinase domain profile. 72 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02410 503 FunFam probable serine/threonine-protein kinase At4g35230 44 148 - -
Vivi7g02410 503 Gene3D Phosphorylase Kinase; domain 1 42 148 - -
Vivi7g02410 503 Coils Coil 475 495 - -
Vivi7g02410 503 SUPERFAMILY Protein kinase-like (PK-like) 47 322 IPR011009 -
Vivi7g02410 503 Pfam Protein tyrosine and serine/threonine kinase 86 318 IPR001245 GO:0004672|GO:0006468
Vivi7g02410 503 Gene3D Transferase(Phosphotransferase) domain 1 150 335 - -
Vivi7g02410 503 SUPERFAMILY TPR-like 395 496 IPR011990 GO:0005515
Vivi7g02410 503 FunFam probable serine/threonine-protein kinase At4g35230 392 501 - -
Vivi7g02410 503 FunFam probable serine/threonine-protein kinase At5g41260 150 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02410 Vivi-Chr7 88059800 88068578 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02410 57 326 Glycoside Hydrolase AT3G07070 35.906 8.81e-47 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Vivi7g02410 PK_Tyr_Ser-Thr 1.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02410 K14500 - gmx:100808907 900.197