Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02392 ATGAAACCAATAAAATTCGGATTATCATTTTTATTTTTGTTGCTGGCCTCTAAATCCTTCATTGCAGAATCAAAATGTAGCAAAACTTGTGACTTAGCTTTAGCTTCCTATACTATACCTGTTGGTGTAGATCTCGCATATATTTCAAATACCATGCAATCCAAGGTTGTTTCTAAACGTGAAGATATTTTAATCTACAACTCAGACACAATGTCAAACCCAGATGTTATCCTATCACATTCAAGAGTGAATGTTCCCTTTCCTTGTGATTGCATCAATGATGAGTTTCTTGGTCACACATTTCTCTACGAAGTTCAACTAGGAGATAACTATGATTCAATTGCTGAGTTGAATTTTAGCAATTTGACCACTGTGGAGCGATTGGAGCGAGACAATGTTTATACAAGAAACAATATCCCTGATTTTGCGAAGGTTAATGTCACTGTTAACTGTTCCTGCGGGAACAGAGAGGTTTCTAAGGATTATGGATTGTTCATCACATATCCACTTAATTCTGAAGACACTTTGGAGTCTATTGCAAAGGATACAAATCTTGAGGCTGATTTGTTGCAGAGGTATAACCCTGGTGTTGATTTCAGCCAAGGGTTCGGTCTTGTTTTTATTCCGGGGAAAGATGTAAATGGAGTTTATGTTCCTCTTCCCCCTAGAAAAGAATCTCACTTAGCTAGAGGTTTAGTTATCGCTGGAATATCTTTTGGAGGAATATGTATGCTACTGTTATTAGCAATTTGTATATATGTTAGATACTTTCGAAAGAAGAATGGAAAGAAGTCTATGTTTTCAACTAAAGATGCCAATGGTGATACTGGATCCAAATTTATTGTGGTGAAAAAATCACCAGAGTTTTCGTTCATAGAACTAGCCAATGCTACAGATAATTTCAGTTTGGCTAAAAAAATTGGTCATGGTGGTTTTGGAGAGGTCTACTATGGAGAGCTAAGAGGCAAGAAAACTGCAATAAAAAAGATGAAGATGCAAGCAACAAGAGAATTTCTTGCTGAACTCAAAGTCTTAACAAGTGTTCATCACTGCAACCTGGTACATTTGATTGGATATTGTGTTGAGGAATCTCTATTCCTTGTGTATGAATACATGGACAATGGAAACTTAAGCCAACCTCTACATAACTCAGAGAGAGAACCGATGTCGTGGTCTACCAGGTTGCGAATTGCTCTGGATGTAGCAAGGGGCCTCGAGTATATTCATGATCATTCAGTGCCTGTATATATCCATCGAGACATTAAATCAGATAACATTTTATTAAACGAAAACTTCACTGCAAAGATTGCAGATTTTGGATTAACCAAGCTTACTGATGTTGCAAGTTCAACACGTAACACTGATCATGTGGCAGGCACATTTGGTTACATGCCGCCTGAAAATGCATACGGACACATTTCTCGCAAGATAGATGTATATGCTTTTGGAGTTGTTCTTTATCAACTAATATCTGCCAAAGAAGCTGTGATCAAGATCGATAAACCTAGTGCCGAGTTCAAAAGTTTTGAAATTAAGACAGATGAATCTACTGATGAATACAAGAGCCTTGTAGCCTTGTTTGATGAAGAGGGAGATTCTATAGAAGGTCTAAGAAAAATGGTGGATCCAAGGCTAGGAGATAACTACTCAATTGATTCCATTAACAAGATGGCACAACTTGCAAAGGATTGCACAAATCGAGATCCGAAAGGACGTCCGAGAATGAGAGCGGTTGTGGTTTCACTGATGAAACTAAATTCTAGTATTGATGATGGAAGTATGAGAAGTAGTGAAGCATTGAGTCCTATTAAGGAGCTTGATGAACAAAACTGA 1833 0.3759 MKPIKFGLSFLFLLLASKSFIAESKCSKTCDLALASYTIPVGVDLAYISNTMQSKVVSKREDILIYNSDTMSNPDVILSHSRVNVPFPCDCINDEFLGHTFLYEVQLGDNYDSIAELNFSNLTTVERLERDNVYTRNNIPDFAKVNVTVNCSCGNREVSKDYGLFITYPLNSEDTLESIAKDTNLEADLLQRYNPGVDFSQGFGLVFIPGKDVNGVYVPLPPRKESHLARGLVIAGISFGGICMLLLLAICIYVRYFRKKNGKKSMFSTKDANGDTGSKFIVVKKSPEFSFIELANATDNFSLAKKIGHGGFGEVYYGELRGKKTAIKKMKMQATREFLAELKVLTSVHHCNLVHLIGYCVEESLFLVYEYMDNGNLSQPLHNSEREPMSWSTRLRIALDVARGLEYIHDHSVPVYIHRDIKSDNILLNENFTAKIADFGLTKLTDVASSTRNTDHVAGTFGYMPPENAYGHISRKIDVYAFGVVLYQLISAKEAVIKIDKPSAEFKSFEIKTDESTDEYKSLVALFDEEGDSIEGLRKMVDPRLGDNYSIDSINKMAQLAKDCTNRDPKGRPRMRAVVVSLMKLNSSIDDGSMRSSEALSPIKELDEQN 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02392 610 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Vivi7g02392 610 ProSiteProfiles Protein kinase domain profile. 301 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02392 610 FunFam LysM receptor kinase 2 280 371 - -
Vivi7g02392 610 Gene3D Phosphorylase Kinase; domain 1 272 371 - -
Vivi7g02392 610 MobiDBLite consensus disorder prediction 591 610 - -
Vivi7g02392 610 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 598 IPR044812 GO:0019199|GO:0045087
Vivi7g02392 610 SUPERFAMILY Protein kinase-like (PK-like) 279 582 IPR011009 -
Vivi7g02392 610 Pfam Protein tyrosine and serine/threonine kinase 302 495 IPR001245 GO:0004672|GO:0006468
Vivi7g02392 610 FunFam PTI1-like tyrosine-protein kinase 3 372 596 - -
Vivi7g02392 610 Gene3D Transferase(Phosphotransferase) domain 1 372 601 - -
Vivi7g02392 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Vivi7g02392 610 SMART serkin_6 301 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02392 Vivi-Chr7 87492705 87495726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02392 4 588 Receptor kinase-like Gene Family AT3G21630 51.550 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi7g02392 PK_Tyr_Ser-Thr 2.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02392 - K13429 vvo:131616003 787.719