Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02391 ATGAAACTAAAATCTTGCTTACTATTGTTTCTTTTTGTGGAGTGTGTTTTTTTCAAAGTGGAATCCAAGTGTGTGAAGGGGTGTGATATAGCTTTAGCTTCCTACTATGTCAAGCCTGCATTTAAACTCCAAAATATAATAAACTTTATGCAATCAAAAATTGTGTCAGAGTTCAATTCTTCTGATGTTTTAATCAGATACAATAGACACATAGTATCCAATCGCGCTAATATCTTTTCCTATTTTAGAGTCAACGATCCATTCCCATGTGACTGTATTGGAGGTGAATTTTTGGGACATGTGTTTGAATACACAGCAAATGAAAGAGACACTTATGATTTGATTGCAAATTCTTATTACGCAAGTTTGACTTCAGTTGAAGTTTTGCGAAAGTTCAACAGCTATGATCCAAATCATATACCTATTAAGGCTAAGGTTAATGTTACTGTCAACTGTTCTTGTGGGAACAGCCAGATTTCAAAAGATTATGGATTGTTTATTACTTATCCGTTAAGGTCTACGGATACTCTTGAGAAGATTGCGAATCAGACTGAACTTGATGAAGGGTTGATACAGAATTTTAATCCTGATGTCAATTTCAGCAAAGGGAGTGGGATTGCGTTCATTCCAGGAAGAGGTCAAAATGGAGATTATGTTTCCTTGTATCCCAGAACAGCAGGCCTTGCTAAGGGTGCAACTGTTGGCATATCTATAGCAGGAATATTTGGGCTTCTATTATTTGTTATCTGTATCTATGTCAAATACTTCCAAAAGAAGGGAGAAAAGAAAGCGATACAGAAAAAAACTTCTTTGGCTCTTTCAACTCGAAATGGTAATGTTGTTTCTATATCCGGTGATGTCTCAGGATATGAAACTTCGGGATCTATTGGGCATGCTACTAGCCTTACCGGAGTTATGATGGAAAAGTCAACAGAGTTTTCATTTGAAGAACTAGCAAAGGCTACAGATAACTTCAGCTTGGATCGTAAAATTGGTCAAGGTGGATTCGGAACTGTCTATTATGCAGAACTTAGAGGCAAGAAAACTGCAATAAAAAAGATGAAGATCCAAGCAACAAGAGAATTTCTTGCTGAACTCAAAGTCTTAACAAGTGTTTATCACTGGAACCTGGTACACTTGATTGGATACTGTGTTGAGGGATTTCTATTTCTTGTATATGAATACATGGACAATGGAAACTTAAGCCAACATCTACGTGATTCAGAGAGAGAACCGATGCCGTGGTCTACGAGGATACAAATTGCTCTGGATGTGGCTAGAGGCCTTGAGTATATTCATGATCATTCAGTTCCTGTATATATCCATCGCGACATAAAATCAGATAATATTTTACTAAATGAAAACTTCACTGGGAAGATTGCAGATTTTGGATTAACCAAACTTACTGATGTTGCAAGTTCAACAGATAACACTATTCATGTGGCAGGCACATTTGGTTACATGCCTCCGGAAAATGCATACGGGCGTATTTCTCACAAAATAGATGTATATGCTTTTGGAGTTGTTCTTTATCAACTAATTTCTGCTAAAGAAGCTGTGATCAAGATCGATAAACATAGTACCGAGTTCACTAGTCTTGAGATTAAGACTAATGAATCTATTGAGGAATACAAGAGCCTTGTGGCTTTGTTTGATGAAGCTATTGATGAAGAAGGAGATTCCATAGAAGGTCTAAGAAAGTTGGTGGATCCAAGGCTAGGAGATAACTATTCAATTGATTCCATTAACAAGATGGCACAGCTTGCCAAGGATTGCACAAATCGAGATCCAAAAGGGCGTCCAAGAATGAGAGCTGTTGTGGTTTCTTTAATGAAACTAAATTCTATTATTGATGATGGAAATATGACAGGTAGTGAAGCACTGAGTCTCACTATGGAGCATGATGAGTTACATTAA 1917 0.3704 MKLKSCLLLFLFVECVFFKVESKCVKGCDIALASYYVKPAFKLQNIINFMQSKIVSEFNSSDVLIRYNRHIVSNRANIFSYFRVNDPFPCDCIGGEFLGHVFEYTANERDTYDLIANSYYASLTSVEVLRKFNSYDPNHIPIKAKVNVTVNCSCGNSQISKDYGLFITYPLRSTDTLEKIANQTELDEGLIQNFNPDVNFSKGSGIAFIPGRGQNGDYVSLYPRTAGLAKGATVGISIAGIFGLLLFVICIYVKYFQKKGEKKAIQKKTSLALSTRNGNVVSISGDVSGYETSGSIGHATSLTGVMMEKSTEFSFEELAKATDNFSLDRKIGQGGFGTVYYAELRGKKTAIKKMKIQATREFLAELKVLTSVYHWNLVHLIGYCVEGFLFLVYEYMDNGNLSQHLRDSEREPMPWSTRIQIALDVARGLEYIHDHSVPVYIHRDIKSDNILLNENFTGKIADFGLTKLTDVASSTDNTIHVAGTFGYMPPENAYGRISHKIDVYAFGVVLYQLISAKEAVIKIDKHSTEFTSLEIKTNESIEEYKSLVALFDEAIDEEGDSIEGLRKLVDPRLGDNYSIDSINKMAQLAKDCTNRDPKGRPRMRAVVVSLMKLNSIIDDGNMTGSEALSLTMEHDELH 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02391 638 SMART serkin_6 325 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02391 638 Gene3D Transferase(Phosphotransferase) domain 1 396 626 - -
Vivi7g02391 638 Pfam Protein tyrosine and serine/threonine kinase 326 523 IPR001245 GO:0004672|GO:0006468
Vivi7g02391 638 SUPERFAMILY Protein kinase-like (PK-like) 306 610 IPR011009 -
Vivi7g02391 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Vivi7g02391 638 ProSiteProfiles Protein kinase domain profile. 325 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02391 638 FunFam LysM receptor kinase 2 304 395 - -
Vivi7g02391 638 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 5 624 IPR044812 GO:0019199|GO:0045087
Vivi7g02391 638 FunFam PTI1-like tyrosine-protein kinase 3 396 623 - -
Vivi7g02391 638 Gene3D Phosphorylase Kinase; domain 1 298 395 - -
Vivi7g02391 638 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02391 Vivi-Chr7 87477805 87485938 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02391 1 630 Receptor kinase-like Gene Family AT3G21630 49.454 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi7g02391 PK_Tyr_Ser-Thr 6.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02391 - K13429 vvo:131616003 1195.26