Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02389 ATGAAACTAAAAAATGGTTTACTATTGTTCTTTATGTTTGTGGAGTGTGTTTTTTTCAAAGTGGATTCAAAGTGTGTGAAAGGGTGTGATATAGCTTTAGCTTCTTACTATGTCATGCCATTAGTTGACCTCCCAACAATAACAAACTATATGCAATCAAAGATTGTTACAAACTCTTCTGATGTTTTAAATAGTTACAACAAAGTCTTAGTAACCAATCATGGTAATATTTTTTCCTATTCTAGAATCAACATTCCATTCCCATGTGAATGTATTGGAGGCGAGTTCTTAGGACATGTGTTTGAGTACACAACAAAGGAAGGAGATACTTATGATTTGATTGCAAATGATTATTATGTAAGTTTGACTAGTGTTGCGCTTTTGAAAAAGTTCAATAGTTATGATCCGAATCATATACCTGATAAGGCTAAGGTTAATGTCACTGTGAGTTGTTCTTGTGGGAATAGCCAGATTTCAAAAGATTATGGATTGTTTGTTACTTATCCGTTAAGGTCTACGGATAGTCTTGAGAAGATTGCGAACGAGGCTAAACTTGATGAAGGGTTGATACAGAATTTCAATCCTGATGTTAATTTCAGTAGAGGAAGTGGGATAGTGTTCTTTCCAGGACGAGATAAAAATGGACGATATGTTCCTTTGTATCCTAGAACAGGTTTTGCTAAGGGTGCAGCTGTTGGTATATCGATAGCGGGAGTATTTGTGCTTCTGTTATTTGTTATCTGTATATATGTCAAATACTTCCAAAAAAAGGAAGAAGAGAAAACTATACTGCCACAAATTTCTAAGGCGCTTTCAACTCAAGATGCCTCGGGTAGTGGAGAATATGAAACATCAGGATCCAGTGGATATGGTACTGGTAGTGCGGCTGGCCTTACAGGAATTATGGTGGCAAAGTCAACCGAGTTTTCATATCAAGAACTTGCCAAGTCTACAAATAACTTTAGTTTGGATAATAAAATTGGTCAAGGGGGATTTGGAGCTGTCTATTATGCCGAACTCAGAGGCGAGAAAACAGCTATTAAGAAAATGAATGTACAAGCGTCAACAGAATTTCTTTGTGAGTTGAAGGTCTTAACACATGTTCATCATTTGAATCTGGTGAGGTTGATTGGATATTGCGTCGAAGGATCACTTTTCCTTGTATATGAACACATTGACAATGGAAACTTGGGTCAATATTTACACGGTTTAGGTAAAGAACCATTGCCATGGTCTAGTAGAGTCCAAATTGCTCTAGATTCTGCAAGAGGCCTTGAATACATTCATGAACACACTGTGCCTGTTTATATCCATCGCGATGTAAAATCCGCAAACATATTGATAGACAAAAACTTGCGCGGAAAGGTCGCAGATTTCGGCTTGACCAAACTTATTGAAGTTGGGAACTCAACACTTCACACTCGTCTTGTTGGAACTTTTGGATACATGCCACCAGAATATGCTCAATATGGTGACATTTCTCCGAAAATAGATGTATATGCTTTTGGAGTTGTTCTTTATGAACTAATTTCTGCAAAGAATGCTGTTCTGAAGACAGGTGAAGAATCAGTTGCTGAATCAAAGGGACTTGTAGCCTTGTTTGAAAAAGCACTTAATCAAATTGATCCTTCAGAAGCTCTTCGCAAATTGGTGGATCCTAGGCTTAAAGAAAACTATCCAATTGATTCTGTTTTAAAGATGGCTGAACTTGGGAGAGCATGTACAAGAGACAATCCACTACTACGCCCAAGTATGAGATCTTTAGTTGTTGATCTTATGACACTTTCATCGCCACTTGAAGATTGTGATGACGATAATTCCTATGAAAATCAAACTCTCATAAATCTATTGTCAGTGAGATGA 1863 0.372 MKLKNGLLLFFMFVECVFFKVDSKCVKGCDIALASYYVMPLVDLPTITNYMQSKIVTNSSDVLNSYNKVLVTNHGNIFSYSRINIPFPCECIGGEFLGHVFEYTTKEGDTYDLIANDYYVSLTSVALLKKFNSYDPNHIPDKAKVNVTVSCSCGNSQISKDYGLFVTYPLRSTDSLEKIANEAKLDEGLIQNFNPDVNFSRGSGIVFFPGRDKNGRYVPLYPRTGFAKGAAVGISIAGVFVLLLFVICIYVKYFQKKEEEKTILPQISKALSTQDASGSGEYETSGSSGYGTGSAAGLTGIMVAKSTEFSYQELAKSTNNFSLDNKIGQGGFGAVYYAELRGEKTAIKKMNVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGNLGQYLHGLGKEPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNLRGKVADFGLTKLIEVGNSTLHTRLVGTFGYMPPEYAQYGDISPKIDVYAFGVVLYELISAKNAVLKTGEESVAESKGLVALFEKALNQIDPSEALRKLVDPRLKENYPIDSVLKMAELGRACTRDNPLLRPSMRSLVVDLMTLSSPLEDCDDDNSYENQTLINLLSVR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02389 620 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Vivi7g02389 620 SMART serkin_6 321 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02389 620 Pfam LysM domain 103 138 IPR018392 -
Vivi7g02389 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Vivi7g02389 620 Gene3D Phosphorylase Kinase; domain 1 301 391 - -
Vivi7g02389 620 Gene3D Transferase(Phosphotransferase) domain 1 392 615 - -
Vivi7g02389 620 FunFam LysM receptor kinase 2 300 391 - -
Vivi7g02389 620 FunFam PTI1-like tyrosine-protein kinase 3 392 606 - -
Vivi7g02389 620 SUPERFAMILY Protein kinase-like (PK-like) 303 592 IPR011009 -
Vivi7g02389 620 ProSiteProfiles Protein kinase domain profile. 321 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02389 620 Pfam Protein tyrosine and serine/threonine kinase 322 591 IPR001245 GO:0004672|GO:0006468
Vivi7g02389 620 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 7 606 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02389 Vivi-Chr7 87471893 87475011 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02389 1 620 Receptor kinase-like Gene Family AT3G21630 53.440 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi7g02389 PK_Tyr_Ser-Thr 4.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02389 - K13429 tpra:123921801 1040.8