Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02386 ATGGAGAATATGTTCCTTTGTATCCTAGGTCTGGGTAAGGGTGTTGCAGCTGGTATATCTATAGCAGGAATATTTGCGCTTCTGTTATTTGTAATCTGTATATATGTCAAATACTTCCAAAAGAAGGAAGAAGAGAAAGCTAAACTTCCACAAATTTCTACGGCACTTTCAGCTCAAGATGGTAATGCCTCAGGCAGTGGAGAATATGAAACTTCAGGATCTAGTGGGCATGGCACTGGTAGTACTGCTGGCCTTACAGGAATTATGGTGGCAAAGTCAACTGAGTTTTCATATCAAGAACTAGCAAAAGCTACAAATAACTTCAGCTTGGATAATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGTACTCAGAGGCGAGAAAACAGCAATTAAGAAGATGGATGTACAAGCGTCTACAGAATTTCTTTGCGAGTTGCAAGTCTTAACACATGTTCATCACTTGAATTTGGTGAGGTTGATTGGATATTGTGTCGAGGGATCACTTTTCCTTGTATATGAACATATTGACAATGGAAACTTGGGTCAATATTTGCACGGTATAGATAAAGCGCCATTACCATGGTCTAGTAGGGTGCAAATTGCTCTAGATTCCGCAAGAGGCCTTGAATACATTCATGAACACACTGTACCAGTGTATATCCATCGTGATGTAAAATCAGCGAATATATTAATAGACAAAAACTTGCACGGAAAGGTTGCAGATTTTGGCTTGACAAAACTTATTGAAGTTGGAAACTCCACACTTCACACTCGTCTTGTTGGAACTTTTGGATACATGCCACCAGAATATGCTCAATATGGTGATGTTTCTCCAAAAATAGATGTATATGCTTTTGGAGTTGTTCTTTATGAGCTAATTTCAGCAAAGAATGCTGTTCTTAAGACAGGTGAATCTGCTGTTGAATCAAAGGGTCTTGTAGCCTTGTTTGAAGAAGCTCTTAATCAAATTGATCCTTTAGAAGCTCTTCGCAAACTGGTGGATCCTAGGCTTAAAGAAAACTATCCAATTGATTCGGTTTTAAAGATGGCTCAACTTGGGAGAGCATGTACAAGAGACAATCCACTGCTACGCCCAAGTATGAGATCTTTAGTTGTTGCTCTTATGACACTCTCATCGCATACTGATGATGATGACACTTTCTATGAAAATCCATCTCTCACAAGTCTATTGTCAGTGAGATGA 1215 0.3901 MENMFLCILGLGKGVAAGISIAGIFALLLFVICIYVKYFQKKEEEKAKLPQISTALSAQDGNASGSGEYETSGSSGHGTGSTAGLTGIMVAKSTEFSYQELAKATNNFSLDNKIGQGGFGAVYYAVLRGEKTAIKKMDVQASTEFLCELQVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGNLGQYLHGIDKAPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNLHGKVADFGLTKLIEVGNSTLHTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKNAVLKTGESAVESKGLVALFEEALNQIDPLEALRKLVDPRLKENYPIDSVLKMAQLGRACTRDNPLLRPSMRSLVVALMTLSSHTDDDDTFYENPSLTSLLSVR 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02386 404 ProSitePatterns Protein kinases ATP-binding region signature. 114 136 IPR017441 GO:0005524
Vivi7g02386 404 SMART serkin_6 108 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02386 404 MobiDBLite consensus disorder prediction 58 78 - -
Vivi7g02386 404 SUPERFAMILY Protein kinase-like (PK-like) 89 378 IPR011009 -
Vivi7g02386 404 FunFam PTI1-like tyrosine-protein kinase 3 179 392 - -
Vivi7g02386 404 ProSiteProfiles Protein kinase domain profile. 108 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02386 404 FunFam LysM receptor kinase 2 87 178 - -
Vivi7g02386 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Vivi7g02386 404 Gene3D Transferase(Phosphotransferase) domain 1 179 396 - -
Vivi7g02386 404 Pfam Protein tyrosine and serine/threonine kinase 109 377 IPR001245 GO:0004672|GO:0006468
Vivi7g02386 404 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 13 389 IPR044812 GO:0019199|GO:0045087
Vivi7g02386 404 Gene3D Phosphorylase Kinase; domain 1 88 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02386 Vivi-Chr7 87458965 87462400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02386 10 404 Receptor kinase-like Gene Family AT3G21630 61.809 7.55e-161 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi7g02386 PK_Tyr_Ser-Thr 5.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02386 - K13429 vvo:131616004 763.837