Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02381 ATGGAATTGGAACCAACCAAATTCATATTATCATTTCTATTCTTATTACTAGCCTCTAAATTTTCCCCTACAGAATCAAAATGTAGCAAAACTTGTGATACAGCTTTAGCTTCTTATTATCTATGGTATGGTTCAAATCTCACCTATGTTTCAAAAATCATGCAATCCAACCTTGTCACAAAACCCGAAGATATTGTCAGTTACAACACAGACACAATCAAAAACAAAGATTTGGTCCTATCTTACACAAGAGTGAATGTTCCATTCCCTTGTGATTGCATCAATGATGAATTTCTTGGTCACACATTTCAGTACCATGTTGGAACAGGTGATACCTATATGTCTGTTGCTAATAGGAATTACTCCAATTTGACAACTTCTGAGTGGTTGCATAGCTTCAATACCTATCCATCAGATAATATTCCTGATACTGGAACTCTGAATGTTACTGTTAATTGTTCTTGTGGGAATAGTCATGTTTCTAAGGATTATGGTTTGTTTATTACTTATCCTCTTAGAATTGAGGATTCTTTGGAATCGATTTCGAATAAGACTAAAGTTAATGCTGAGTTGTTGCAGAAGTATAACCCTGGTGTGAATTTTAGTCAAGGGAGTGGTTTGGTTTATATTCCTGGGAAAGACACAAATGGTAACTATGTGCCTTTTCACACAAGCACTGGAGGTCTATCAGGTGGAATTATCACTGGAATATCTCTTGGAGCAGTAGCAGGATTAATGCTATTAGGATTTTTTATTTATATCACATGTTACCGAAATAAAAACGTACGGAATCAAGAGTTTCTCTCAGAAGAAACCAGCGCAATTGTTGAAGTCTCTGGTAATGCTACATATGGAACTTCAGATTCTTTGAGTCCTGCTAATATCATTGGCATTAGGGTGGAAAAATCAGGGGAGTTTTCTTATGAAGAACTAGCTAATGCTACGAATAACTTCAATTTGGCTAACAAAATCGGTCAAGGAGGTTTCGGTGAAGTCTATTACGCCGTGTTGAATGGTGAGAAAGCTGCAATAAAAAAGATGGACATGAAAGCGTCAAAAGAATTTCTAGCTGAGCTTAAGGTGTTGACGCGTGTTCATCACTTGAACTTGGTACGGTTGATTGGATATTGCGTTGAAGGATCGCTTTTCCTTGTGTACGAATACATTGATAATGGAAACTTAAGTCAACATCTTCGCAGTTCAGAAGGAGTACCTTTGTCATGGACGTCGAGGACTAAAATTGCTCTGGATTCAGCAAGAGGTCTTGAATACATTCATGAGCATACCGTGCCTACTTATATTCATCGTGACATAAAGTCCGAAAATATTTTGTTAGACAAAAACTTCTGTGCTAAGGTTGCAGATTTCGGATTAACCAAGCTGATCGATGCAGGAAGTTCATCAGTTCCTACTGCTAATATGGCAGGCACATTTGGTTACATGCCACCAGAATATGCATATGGTAGTGTTTCTTCCAAAATCGATGTATATGCTTTCGGAGTTGTTCTTTATGAACTAATTTCTGCTAAAGGAGCTGTGATAATGGGAGGTGAATCTGGTGCTGATTTAAAAGGCCTTGTAGTTTTGTTTGATGAAGTTTATGATCAACCAAATCCTATAGAAGGTTTTAAGAAACTGGTGGATCCTAGGCTTGGAGATAACTATTCAATTGATTCAGTTTTAAAGATGGCACAACTTGCAAAAGCATGCACAGAGAGTGATCCACAACAGCGTCCAAATATGAGCTATGTTGTAGTTGCTCTGACTACATTAACTTCAACAACTGAGGAATGGGATATCACTTCTATATACAAAAATCCAAATCTTGTAAATTTAATGTCAGGAAGATAG 1851 0.3712 MELEPTKFILSFLFLLLASKFSPTESKCSKTCDTALASYYLWYGSNLTYVSKIMQSNLVTKPEDIVSYNTDTIKNKDLVLSYTRVNVPFPCDCINDEFLGHTFQYHVGTGDTYMSVANRNYSNLTTSEWLHSFNTYPSDNIPDTGTLNVTVNCSCGNSHVSKDYGLFITYPLRIEDSLESISNKTKVNAELLQKYNPGVNFSQGSGLVYIPGKDTNGNYVPFHTSTGGLSGGIITGISLGAVAGLMLLGFFIYITCYRNKNVRNQEFLSEETSAIVEVSGNATYGTSDSLSPANIIGIRVEKSGEFSYEELANATNNFNLANKIGQGGFGEVYYAVLNGEKAAIKKMDMKASKEFLAELKVLTRVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLSQHLRSSEGVPLSWTSRTKIALDSARGLEYIHEHTVPTYIHRDIKSENILLDKNFCAKVADFGLTKLIDAGSSSVPTANMAGTFGYMPPEYAYGSVSSKIDVYAFGVVLYELISAKGAVIMGGESGADLKGLVVLFDEVYDQPNPIEGFKKLVDPRLGDNYSIDSVLKMAQLAKACTESDPQQRPNMSYVVVALTTLTSTTEEWDITSIYKNPNLVNLMSGR 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02381 616 Gene3D Phosphorylase Kinase; domain 1 293 388 - -
Vivi7g02381 616 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Vivi7g02381 616 SMART serkin_6 318 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02381 616 FunFam LysM receptor kinase 2 297 388 - -
Vivi7g02381 616 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 602 IPR044812 GO:0019199|GO:0045087
Vivi7g02381 616 FunFam PTI1-like tyrosine-protein kinase 3 389 602 - -
Vivi7g02381 616 Pfam LysM domain 174 201 IPR018392 -
Vivi7g02381 616 Pfam Protein tyrosine and serine/threonine kinase 319 586 IPR001245 GO:0004672|GO:0006468
Vivi7g02381 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Vivi7g02381 616 Gene3D Transferase(Phosphotransferase) domain 1 389 607 - -
Vivi7g02381 616 ProSiteProfiles Protein kinase domain profile. 318 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02381 616 CDD STKc_IRAK 324 585 - -
Vivi7g02381 616 SUPERFAMILY Protein kinase-like (PK-like) 299 588 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02381 Vivi-Chr7 87391666 87395448 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02381 15 616 Receptor kinase-like Gene Family AT3G21630 56.543 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi7g02381 PK_Tyr_Ser-Thr 7.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02381 K13429 - gmx:100803042 866.685