Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02366 ATGGCATGGCCAAACTTAATAACACTAATCATCTTTTCCTTCATCTCAAACACAATCTCCCAACAAGAATACGTCAACAACAAACAACTAGATTGCGAAAACACATACAACTCAACATCAGGCAACGTTTGCAACAGCGTCAATTCATGTCAATCATACCTCACCTTCAAATCAAACCCCCCATACAACACTCTCTCTTCCATTTCCAAACTCCTCAACGCTTCACCTTCCCTCGTTTCCCAATCCAACAACAACATCTCCACCCTCCAAACCATCCCCTCCGACACAATCCTAACCGTCCCCGTTACCTGTTCCTGTTCCGGTAACAAAAATTACTACCAACACAACACTTCCTACACTCTCAAAACCCTCGGTGAAACCTATTTCTCTGTCGCTAATCTCACCTACGAAGCTCTCACCACCTGTCAAGCTCTTATTGCCCAGAATCCTTACGGTATTCGAAACCTCACTGTTGGTCTCAACATAACTGTTCCTCTCAGATGTGCTTGTCCCACCAAGAAACAGACAGATCAAGGAATCAAGTATCTTCTCACGTACTTGGTCTCTGAGGGTGAATCCGTTTCTTCAATCGCTGATCTTTTCGGCGTTGATCCACAAACCGTTATTGAAGCAAACAAGCTTTCTTCTGCTTCCATTATTTTCTACTTCACACCTATTTTAGTCCCTCTCAAAAACGAACCACCGAAAAATATTATCAAACAAGCCTCCCCGCCGGAGTCTCCGCCGCCGCCTCCACCGGCGAATCCTGAGGATAGTGGTTCTTCCTCTTCTAAGAAATGGGTCATCGTTGGTGTCGCGGTTGGGGTTGTTGTTTTGCTTTTAGTAGTTCTTGCTTTGTTTTTCCTCTGTTTCTATAAACGGCAACCGGAACTACCTCCGCCGGTGGGTAAACCTTTCTCAGATTCCGACAACCAGAAGATTTCTGATACTATTACTACTACCTCCACAACTCAATCTTGGTCTCTTTCTTCTGAGGGGATTCGTTATGCGGTTGACTCGTTGACTCAGTACAAGTTTCAGGATTTGCAAAATGCAACCATGTTTTTCAGTGAAGAGAACAAGATTAAAGGTTCTGTCTATAGAGCTTCTTTTAAAGGTGATGCTGCTGCTGTTAAGATTCTGAAAGGCGATGTTTCTTCCGAGATTAACATTTTGAAGAGGATTAACCATGCTAATATTATAAGGTTGTCTGGTTTTTGTGTCTACAAAGGTAACACTTATCTTGTTTATGAGTTTGCTCAGAATAACTCTCTTGATGAATGGCTTCACTCTGAGAACAAGAACAAGGATTATGAGAATTCAAATTCGAATTCGAATTCTACGTGTTTGAGTTGGTTTCAGAGAGTTCAGATTGCTCATGATGTTGCTGATGCTCTTAATTACCTTCATAATTATGCTAATCCACCTCATGTTCATAAGAATTTGAAAAGTGGGAATATTCTTTTGGATGGGAAATTTAGAGGTAAAGTTTCAAATTTTGGGTTGGCGAGAGTTATGGAGAATGAAGATAATGAAGGGTTTCAATTAACAAGACATGTAATAGGGACTCAAGGTTACATGGCTCCTGAATATATTGAGAATGGTTTGATTACTCCAAAGATGGATGTTTTTGCTTTTGGTGTTGTGATTTTGGAGCTTCTTTCTGGAAGAGAAGTTGTTGGTGGTGACAAGAATAATGGTTTGGGAGATCAACTTCTTCTGTCATCAACTGTGAATCAAGTTCTTGAAGGGGAAAATGTTAGGGAGAAGCTTAGAGGTTTCATGGATCCAAATTTGAGAGACGAATACCCTTTGGATCTTGCATATTCAATGGCTGAGATTGCTAAAAGATGTGTTAATCGTGACCTGAATTCAAGACCAAATGTTTCGGAGGTTTTCATGGTTTTGTCTAAGATTCAGTCCTCTACATTAGACTGGGATCCATCTGATGAACTTGAAAGGTCCAGATCTGTTAGCCAAGTTTCTGATAGCAGATAG 1998 0.4094 MAWPNLITLIIFSFISNTISQQEYVNNKQLDCENTYNSTSGNVCNSVNSCQSYLTFKSNPPYNTLSSISKLLNASPSLVSQSNNNISTLQTIPSDTILTVPVTCSCSGNKNYYQHNTSYTLKTLGETYFSVANLTYEALTTCQALIAQNPYGIRNLTVGLNITVPLRCACPTKKQTDQGIKYLLTYLVSEGESVSSIADLFGVDPQTVIEANKLSSASIIFYFTPILVPLKNEPPKNIIKQASPPESPPPPPPANPEDSGSSSSKKWVIVGVAVGVVVLLLVVLALFFLCFYKRQPELPPPVGKPFSDSDNQKISDTITTTSTTQSWSLSSEGIRYAVDSLTQYKFQDLQNATMFFSEENKIKGSVYRASFKGDAAAVKILKGDVSSEINILKRINHANIIRLSGFCVYKGNTYLVYEFAQNNSLDEWLHSENKNKDYENSNSNSNSTCLSWFQRVQIAHDVADALNYLHNYANPPHVHKNLKSGNILLDGKFRGKVSNFGLARVMENEDNEGFQLTRHVIGTQGYMAPEYIENGLITPKMDVFAFGVVILELLSGREVVGGDKNNGLGDQLLLSSTVNQVLEGENVREKLRGFMDPNLRDEYPLDLAYSMAEIAKRCVNRDLNSRPNVSEVFMVLSKIQSSTLDWDPSDELERSRSVSQVSDSR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02366 665 Gene3D Transferase(Phosphotransferase) domain 1 421 657 - -
Vivi7g02366 665 MobiDBLite consensus disorder prediction 237 260 - -
Vivi7g02366 665 MobiDBLite consensus disorder prediction 647 665 - -
Vivi7g02366 665 SMART LysM_2 185 229 IPR018392 -
Vivi7g02366 665 Gene3D Phosphorylase Kinase; domain 1 316 419 - -
Vivi7g02366 665 FunFam PTI1-like tyrosine-protein kinase 3 420 650 - -
Vivi7g02366 665 MobiDBLite consensus disorder prediction 241 257 - -
Vivi7g02366 665 Pfam LysM domain 186 221 IPR018392 -
Vivi7g02366 665 MobiDBLite consensus disorder prediction 645 665 - -
Vivi7g02366 665 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 9 649 - -
Vivi7g02366 665 SUPERFAMILY LysM domain 184 229 IPR036779 -
Vivi7g02366 665 Pfam Protein kinase domain 383 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02366 665 ProSiteProfiles LysM domain profile. 184 228 IPR018392 -
Vivi7g02366 665 ProSiteProfiles Protein kinase domain profile. 352 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02366 665 SUPERFAMILY Protein kinase-like (PK-like) 336 633 IPR011009 -
Vivi7g02366 665 Gene3D LysM domain 171 241 IPR036779 -
Vivi7g02366 665 CDD LysM 185 221 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02366 Vivi-Chr7 87200042 87202322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02366 9 658 Receptor kinase-like Gene Family AT2G33580 53.651 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi7g02366 Pkinase 5.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02366 - - tpra:123921078 955.666