Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02331 ATGGTAACCCTTTCGCTTCTGCATAATCTAAACCTCCCTCTTCTCTTCAACCCTCCCACACTCCAAAACCCTATCTCCTCAATCTCTCTCAAGCCTTCACAACCCCGCTGTTCACATTCCGCCACTGTTCCCGCTCCTTCTCCGCCACCTCCGATTCGCATCTCACGCGGCCCAAAAATCGAAGCAAAGCATGCCCTACGTGATTACCTTGTCAACACTCGAGGTTACAGTTTCATAGATGCAGATTTTATCTCCAAAAACTCTCCACATTTCATTGATGAACTCATCTCCAGAGTCAGAGTCAACAACAGACACGATGCTTTTGATTTTCCTCGGGCTCTCAGAAGGATGTGGAAGATTTATAGAGATGCAAGAGAGGTTTTTGGGTATGGGAGTGGCGTTTTGTCGAAGAAATTTGAGAGTTATGAGAATTTGGGGTTGAGTAAATCTTCTGTTGTGAAGCTGTTTGTTTGTCGTCCATTGCTTTTAGTTGGCGACGAGGTTGATCCTCAATTTGTTGTTGTTCTTGATCGGTTGAAGAGAATTGGGATTGATATCGGATGGTTTGTCAATTGTATGTTGCCCTCGAGAACATATAGATGGAAAGCGATTATTGATAATATAGAGTTTTTTCGTCAAGGGGGATATTCTGAGAAAGAAATGTATGATTTGTTTACGGCGGATCCTAAATTGTTGTTGGATGGTTTAGGAAAGAGGACATATTTGGTTGTAGGTCAGTTGATTAAGTCCGGTCTTGACGTGGATGAGATTTGTTCTTGTTTCAGAGAGCATCCTGATGTGTTGTCAAGTCCGCGTATGACAAATTTGATGTTTGTGATTTCTTTTATGTATAATGTTCGAATGGACCAAGATGCTATTGCTCATGTTTTGTATAACTACATGCATGAACTTAGCAAACTTTCGATAAAAGGTTATACAACTATGTCTAAAGAGTTGGGAGTTCGAGAAGGTGATTTATGTGAAATGATCCAGGATGATCCGTTAGAATTTTTTAGTTTGGCTTTAAAACCGAAGCAAAAGAAAGATATAAATAAATTCAGATATGACCCGCATAATTATTTGGAGAAAACAAGTTTCTTGCAGAAGCTAGGATATAATGATAACTCTGAGGAGATGGAAATAGCTATGAAGAGGTTTGAAGGGAAAGGTGATAAGTTACAAGAGAGATTTGATTGTCTGGTTGAAGCTGGTTTGGAATATAACACTGTAGTTGGAATGGTAAAGCGAATTCCTGGTATTCTAAGCATTGAGAAAACTCTATTGCAAAAGAAGATTGATTTCTTAAAAAACACTTTAGGTTACCCGATAGAATCTCTCGTGGGATATCGATATCCATCGTATTTTACCAATAACTTGGACCAAATGTATGCAAGATTTGCAATGTATGAGTGGTTGAAGAGGAGGACTGATATAAATCCCGAGCTATCCCTCGCTACCATATTTGCATCTCCTGAGAAACGGTTTCTAAAAATCTTTGTGAATAAGCATCCTGAAGGTCCAACGACTTGGCAAGCTATAAACAGTTTATCTGACAAATTTAAGAATTAA 1569 0.3913 MVTLSLLHNLNLPLLFNPPTLQNPISSISLKPSQPRCSHSATVPAPSPPPPIRISRGPKIEAKHALRDYLVNTRGYSFIDADFISKNSPHFIDELISRVRVNNRHDAFDFPRALRRMWKIYRDAREVFGYGSGVLSKKFESYENLGLSKSSVVKLFVCRPLLLVGDEVDPQFVVVLDRLKRIGIDIGWFVNCMLPSRTYRWKAIIDNIEFFRQGGYSEKEMYDLFTADPKLLLDGLGKRTYLVVGQLIKSGLDVDEICSCFREHPDVLSSPRMTNLMFVISFMYNVRMDQDAIAHVLYNYMHELSKLSIKGYTTMSKELGVREGDLCEMIQDDPLEFFSLALKPKQKKDINKFRYDPHNYLEKTSFLQKLGYNDNSEEMEIAMKRFEGKGDKLQERFDCLVEAGLEYNTVVGMVKRIPGILSIEKTLLQKKIDFLKNTLGYPIESLVGYRYPSYFTNNLDQMYARFAMYEWLKRRTDINPELSLATIFASPEKRFLKIFVNKHPEGPTTWQAINSLSDKFKN 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02331 522 Pfam mTERF 390 496 IPR003690 GO:0003690|GO:0006355
Vivi7g02331 522 Pfam mTERF 208 373 IPR003690 GO:0003690|GO:0006355
Vivi7g02331 522 Gene3D Transcription termination factor 3, mitochondrial 238 511 IPR038538 -
Vivi7g02331 522 SMART mt_12 153 185 IPR003690 GO:0003690|GO:0006355
Vivi7g02331 522 SMART mt_12 411 442 IPR003690 GO:0003690|GO:0006355
Vivi7g02331 522 SMART mt_12 118 148 IPR003690 GO:0003690|GO:0006355
Vivi7g02331 522 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
Vivi7g02331 522 Coils Coil 376 396 - -
Vivi7g02331 522 PANTHER CGI-12 PROTEIN-RELATED 65 503 IPR003690 GO:0003690|GO:0006355
Vivi7g02331 522 MobiDBLite consensus disorder prediction 29 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02331 Vivi-Chr7 86561732 86564032 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi7g02331 mTERF 1.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02331 - - vvo:131621087 1023.08