Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02330 ATGGGGAAGATTTATAGAGAAGCAAGAGAGGTTTTTGGGTATGGGAGTGGCGTTTTGTCGAAGAAATTTGAGAGTTATGAGAATTTGGGGTTGAGTAAATCTTCTGTTGTGAAGCTGTTTGTTTGTCGTCCATTGCTTTTAGTTGGCGACGAGGTTGATCGTCAATTTGTTGTTGTTCTTGATCGGTTGAAGAGAATTGGGATTGATATCGGATGGTTTGTCAATTGTATGTGGCCCCCGAGAACATATATATGGAAAGAGATTATTGATAGTATAGAGTTTTTTCGTCAAGGGGGATATTCTGAGAAAGAAATGTATGATTTGTTTACGGCGGATCCTAAATTGTTGTTGAATGGTTTAGGAAAGAGGACATATTTGGTTGTAGGTCGGTTGATTAAGTCGGGTCTTGACGTGGATGAGATTTGTTCTTGTTTCAGAGAGCATCCTGATGTGTTGTCAAGTCCGCGTATGAAAAATTTGATGTTTGTGATTGCTTTTATGTATAATATTCGAATGGACCAAGATGCTATTGCTCATGTTTTGTATAACTACATGCATGAACTTAGCAAACTTTCGATAAAAGGTTATACAACTATGTCTAAAGAGTTGGGAGTTCGAGAAGGTGATTTATGTGAAATGATCCAGGATGATCCGTTAAAATTTTTTAGTTCGGCTTTAAAACAGAAGCAAAAGAGGGATATAGATAAATTCTACTATGACCCGCATAGTTATTTTGAGAAAACAAGTTTCTTGCAGAAACTGGGATATAATGATAACTCTGAGGAGATGGAAATAGCTATGAAGATGTTTATAGGGAAAGGTGATAAGTTACAAGAGAGATTTGATTGTCTGATTGAAGCTGGTTTGGATTATGACACTGTAGTCGAAATGGTAAAGCGAGTTCCTGGGGTTCTGAACGTTAGGAAAACTCTAATGCTAAAGAAGATTGATTTCTTAAAAAACACTTTAGGTTTCCCAATAGAAGCTCTCGTGGGATATCCAACGTATTTTACCAATAACTTGGACCAAATGTATGCAAGATTTGCAATGTATGAGTGGTTGAAGAAGAGGACTGATATAAATCCCGAGCTATCCCTCACTACCATATTTGCAACTTCTGAGAAACGGTTTCTAGAAATGTTTGTGAATAAGCATCCTGAAGGTCCAACGACTTGGCAAGCTATAAACAGTTTATCTGACAAATTTAAGAATTAA 1215 0.3687 MGKIYREAREVFGYGSGVLSKKFESYENLGLSKSSVVKLFVCRPLLLVGDEVDRQFVVVLDRLKRIGIDIGWFVNCMWPPRTYIWKEIIDSIEFFRQGGYSEKEMYDLFTADPKLLLNGLGKRTYLVVGRLIKSGLDVDEICSCFREHPDVLSSPRMKNLMFVIAFMYNIRMDQDAIAHVLYNYMHELSKLSIKGYTTMSKELGVREGDLCEMIQDDPLKFFSSALKQKQKRDIDKFYYDPHSYFEKTSFLQKLGYNDNSEEMEIAMKMFIGKGDKLQERFDCLIEAGLDYDTVVEMVKRVPGVLNVRKTLMLKKIDFLKNTLGFPIEALVGYPTYFTNNLDQMYARFAMYEWLKKRTDINPELSLTTIFATSEKRFLEMFVNKHPEGPTTWQAINSLSDKFKN 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02330 404 PANTHER CGI-12 PROTEIN-RELATED 27 385 IPR003690 GO:0003690|GO:0006355
Vivi7g02330 404 Pfam mTERF 247 378 IPR003690 GO:0003690|GO:0006355
Vivi7g02330 404 Pfam mTERF 92 231 IPR003690 GO:0003690|GO:0006355
Vivi7g02330 404 Gene3D Transcription termination factor 3, mitochondrial 122 393 IPR038538 -
Vivi7g02330 404 SMART mt_12 37 69 IPR003690 GO:0003690|GO:0006355
Vivi7g02330 404 SMART mt_12 2 32 IPR003690 GO:0003690|GO:0006355
Vivi7g02330 404 SMART mt_12 142 173 IPR003690 GO:0003690|GO:0006355
Vivi7g02330 404 SMART mt_12 295 326 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02330 Vivi-Chr7 86554437 86556628 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi7g02330 mTERF 9.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02330 - - vvo:131621086 821.617