Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02328 ATGGTAACCCCTTCGCTTCTGCATAATCTAAACCTCCCTCTTCTCTTCAACCCTTCCACACCCCAAAACCCTATCTCTTCAATCTCTCTCAAACCTTCACAACCCCGCTGTTCAAATTCCGCCATTGTTCGCGCTCCTTCTTCGCCACCTCCAATTCGCATCAAACCCTACACAAAAATCGAAGCACAGCATGCCCTACAAGAATACCTTTACAACACTCAATGTTACACTTTCATAGACGCTGAATTTATCGCCAAAAATTCTCCGCATTTCATTCATCAACTCATCTCCAGAGTCAGAGTATACAACAGACACTATGCTTTTGATTTTCCTCGGGCTCTCAGAAGGTATCTTATGTATCACCCTATTAATGAATTTGAACCCTTTTTAGAGAGTATAGGGATTCATCCCAGGGAATTGAACTTACTTTTGCCTAAAGATTTGTTTTTTCTTCGTGATGATAGTCTTTTGGTTGATAATTTTCATGTTTTGTTTATTCACGGGGTTCCGAGGAATAGGATGTGGAAGATTTATAGAGAAGCAAGAGAGGTTTTTGGGTATGGGAGTGGCGTTTTGTCGAAGAAATTTGAGAGTTATGAGAATTTGGGGTTGAGTAAATCTTCTGTTGCGAAGCTGTTTGTTTGTTGTCCATTGCTTTTAGTTGGCGACGAGGTTGATCCTCAATTTGTTGTTGTTCTTGATTGGTTGAAGAGAATTGGGATTGATATCGGATGGTTTGTGAATTGTATGTGGCCCTCGAGAACATATAGATGGAAAGCGATTATTGATAGTATAGAGTTTTTTCGTCAAGGGGGATGTTCGGAGAAGCCAATGTATGATTTGTTTAAGGCGGATCCGAAATTGTTATTGGAGGGTTTAGGAAAGAGGATGTATTTGGTTATAGGCCGGTTGGTTAAGTTGGGTCTTGACGTGAATGAGATTTGTTTTTGTTTTCGAGAGCATCCTGATATATTGTCAAGTCGGCGTATGAAAAATTTGATGTCGGTGATTGCTTTTATGTATAATATTCGAATGGAACAAGAAGAGACTACTCGTGTTTTGTATAACTACATGCACATCCTTAGCAAACATTCAATAAAAGGTCATACAACTATGTCTAAAGAGTTAGGAGTTGGAAAAGGTGATTTACGTGAAATGATACAGGATGATCCGTTAGAATTTTTTAGTTTGGCTGTAAAACTGAAGCAGAAGAAGGATAAAAATGAGTTCTACTATGACCTGCATTTGGGGAAAACAAGTTTCTTGCGGAAACTGGGGTATAATGATAACTCTGAGGAGATGGAAATAGCTATGAAGATGTTTGAAGGGAAAGGTGATAAGTTACAAGAGAGATTTGATTGTCTGGTTGAAGCTGGTTTGGAATATGACACTGTAGTTGGAATGGTAAAGCGAGTTCCTGGGATTCTGAGCATTAGGAAAACTGTAATGCAAAAGAAGATTGATTTCTTAAAAAACACTTTAGGTTACCCGATAGAGTTTCTCGCGAGATATTCAAGGTATTTTTTCCATAATTTGGACAAAATATTTGCAAGATTTGCAATGTACAAGTGGTTGAAGAAGAGGAATGTTATAAATCGCGAGTTATACTTGAGTACCATAATTACACCTTCTGAGAAACAGTTTCTAGAACTCTTTGTGAATACGCATCCTGAAGGTCCAACAGCTTGGCAAACTATAAACAGTTTATCTAAAGAATTTAAGAATTAA 1728 0.3808 MVTPSLLHNLNLPLLFNPSTPQNPISSISLKPSQPRCSNSAIVRAPSSPPPIRIKPYTKIEAQHALQEYLYNTQCYTFIDAEFIAKNSPHFIHQLISRVRVYNRHYAFDFPRALRRYLMYHPINEFEPFLESIGIHPRELNLLLPKDLFFLRDDSLLVDNFHVLFIHGVPRNRMWKIYREAREVFGYGSGVLSKKFESYENLGLSKSSVAKLFVCCPLLLVGDEVDPQFVVVLDWLKRIGIDIGWFVNCMWPSRTYRWKAIIDSIEFFRQGGCSEKPMYDLFKADPKLLLEGLGKRMYLVIGRLVKLGLDVNEICFCFREHPDILSSRRMKNLMSVIAFMYNIRMEQEETTRVLYNYMHILSKHSIKGHTTMSKELGVGKGDLREMIQDDPLEFFSLAVKLKQKKDKNEFYYDLHLGKTSFLRKLGYNDNSEEMEIAMKMFEGKGDKLQERFDCLVEAGLEYDTVVGMVKRVPGILSIRKTVMQKKIDFLKNTLGYPIEFLARYSRYFFHNLDKIFARFAMYKWLKKRNVINRELYLSTIITPSEKQFLELFVNTHPEGPTAWQTINSLSKEFKN 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02328 575 Gene3D Transcription termination factor 3, mitochondrial 109 298 IPR038538 -
Vivi7g02328 575 SMART mt_12 210 242 IPR003690 GO:0003690|GO:0006355
Vivi7g02328 575 SMART mt_12 279 310 IPR003690 GO:0003690|GO:0006355
Vivi7g02328 575 SMART mt_12 175 205 IPR003690 GO:0003690|GO:0006355
Vivi7g02328 575 SMART mt_12 315 346 IPR003690 GO:0003690|GO:0006355
Vivi7g02328 575 SMART mt_12 498 531 IPR003690 GO:0003690|GO:0006355
Vivi7g02328 575 SMART mt_12 466 497 IPR003690 GO:0003690|GO:0006355
Vivi7g02328 575 PANTHER CGI-12 PROTEIN-RELATED 197 556 IPR003690 GO:0003690|GO:0006355
Vivi7g02328 575 Pfam mTERF 265 418 IPR003690 GO:0003690|GO:0006355
Vivi7g02328 575 Pfam mTERF 440 549 IPR003690 GO:0003690|GO:0006355
Vivi7g02328 575 Gene3D Transcription termination factor 3, mitochondrial 299 564 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02328 Vivi-Chr7 86548258 86550646 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi7g02328 mTERF 5.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02328 - - psat:127118043 835.484