Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02283 ATGGCAGTATTAACAGAAATAGAAGAAGACAAACTCGGCGAAGAACCAGGTGAGGAAATTGAATCAACACCACCTCAAAAGGTTGGCGAAAAGAGACAATTCACTGCCAATTCACCCATAAAAAAGAAGCTCCTCAAACGTGGACTCGGTTGGGAAACCCCCAATTTCAACGATCATGTTACTGTTCATTACGTTGGAACTTTGCTGGACGGAACAATGTTGGGCTCCACTAGGGTTTCGGATTCTCCCGTCACATTTACTCTTGGCCAAAGTGAAGTGTATGCTGGATTGGATGATGGGATTGTCACCATGAAGAAGGGAGAGGTAGCATTGTTTACATTACCTGCTGCTGAGTCTGAAGGCATTCTGCGAGACGCTAACTCGGTTGTGCAATTTGAGGTGGAACTCGTTTCTTGGATCACTGTAGTGGATGTTTGCAAAGATGGTGGAATTATCAAGGAAATTATGGAGAAGGGTAAAGGGAGTGATCGGCCCGGTGATCTTGATGAAGTTCTTGTGAAGTATCGGGTGGCACTAGTAGATGGTACTGTTGTTGCAGAAACACCGGAATGCGGAGTTGAATTCTATGTGAACGATGGTCATCTTCTTCCTAGATTGCCAAAAGTGATCATGACTATGACCAGGGGAGAGAAGGCCGAATTAATTTTTCAACCTCAATATGCCTTTGGAGAGACAGGGAGAGAAGCTAGCAGTGGGTTCCATTCAATTCCCCCAGACTCAATGCTCTATGTTAACATTGAATTGGTGTCCTTCAAGCCTGTCATAAATGTAACTGGTGACTCTATGGTGATTAAGAAAATTTTGAAAGAATGGGAGGGTGCTTACACAGCCAACAAGGGTGAAAATGTTACTGTCAGTTACACGGCTATGCTAGAAGAGGGCACTGTATTGGAGAAAAGAGGAATTGATGAAATACAACCCTTGAAATTCGTAACTGACGAGGAACAAGTAATTACTGGTCTAGACCAAGCAGTGGCGACAATGAAAAAGGGCGAGAAGGCCATAATTAGCATACATCCTGATTATGCATTTGGAAATATGGAATGTGAGAGCATGAGACACGAAATTCGTACTTCAACTAACGCCATGACCTCAGTTCCCAAGCTATTGAAGTTTATGCGTCCCCATTATGGTACTCTTAAGGCATATTATGAAACTATGACGGCGAGTTTGAAGGAACCAATGTCTATGGCCTTGTCAACTGTAGGGGAGGATGGAAAACCCTTGGCTCGGGTTGTATTGCTAAAAGGCCTTGACAAAGATGAATTTGTGTGGTTCACGAATTACGGCAAGGAGGGATTTGCTGCTAGTTCTTATGCATCAGGATTTGGAGCAATATATCTATCTGTCAGCGGCATGTTGCTGTATTTGTTATCATTTGCTCTTGGTGCTGGCCCGGTTCTTTGTCTCCTCATGTCCGAAATATTACCTGGCAAGATCAGAACCGAAGCAATGACGATTTGTTTGGTTGTGCATTGGGTGATAAACTTCTTTGTTGGTCTATTCTTTTTGCGTTTGCTGGAACAAATGGGGGCACAACTCTTGTACGATATTTTCGGTGCATTTTGTTTGCTGGCTGTGGGTTGCAAGAGTGAAATTTGCATATGGTCTACTTCATATCCCGGAAACACAACATCTGCTAGATCCGGCACTATATCCTATGTAGGAAGTTTATTTAAAGGCTCTGGAATTCGGTATCTCCTGGTTGCTTTTCTTCGAAGTCAAAATGGAGAACATGTTAGCGGCCTTACTTGGAGTCCGGATGGAAGATACTTAGCTTCTGCTTCATACGAGAGCTCTTCTTTCATTGTGTGGTATGTTTCTCAAGGTGTGGGGTCACCTATTCGACGAGGATTAGGAGGCATATCAATGTTAAAATGGTCACCCACTGGAGATTACTTCTTTGCTTCAAAATTTGATAGAACATTTTATCTTTGGAAAACAATCACTTGGACATCAGAGCAATGGTCATCAACTAGCAGTGGTTTTGTCAAGTGTGCAACATGGGATCCAGATGGGCGTATGGTACTGCTCGCCTTTTATAAATTTTCTGTTATGATTGCTCAATTTAAGCAATGGGATCCGGGAGTAATTTTAGAACCTTGA 2127 0.4288 MAVLTEIEEDKLGEEPGEEIESTPPQKVGEKRQFTANSPIKKKLLKRGLGWETPNFNDHVTVHYVGTLLDGTMLGSTRVSDSPVTFTLGQSEVYAGLDDGIVTMKKGEVALFTLPAAESEGILRDANSVVQFEVELVSWITVVDVCKDGGIIKEIMEKGKGSDRPGDLDEVLVKYRVALVDGTVVAETPECGVEFYVNDGHLLPRLPKVIMTMTRGEKAELIFQPQYAFGETGREASSGFHSIPPDSMLYVNIELVSFKPVINVTGDSMVIKKILKEWEGAYTANKGENVTVSYTAMLEEGTVLEKRGIDEIQPLKFVTDEEQVITGLDQAVATMKKGEKAIISIHPDYAFGNMECESMRHEIRTSTNAMTSVPKLLKFMRPHYGTLKAYYETMTASLKEPMSMALSTVGEDGKPLARVVLLKGLDKDEFVWFTNYGKEGFAASSYASGFGAIYLSVSGMLLYLLSFALGAGPVLCLLMSEILPGKIRTEAMTICLVVHWVINFFVGLFFLRLLEQMGAQLLYDIFGAFCLLAVGCKSEICIWSTSYPGNTTSARSGTISYVGSLFKGSGIRYLLVAFLRSQNGEHVSGLTWSPDGRYLASASYESSSFIVWYVSQGVGSPIRRGLGGISMLKWSPTGDYFFASKFDRTFYLWKTITWTSEQWSSTSSGFVKCATWDPDGRMVLLAFYKFSVMIAQFKQWDPGVILEP 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02283 708 SUPERFAMILY FKBP-like 144 260 - -
Vivi7g02283 708 Pfam Pyridoxamine 5'-phosphate oxidase 396 438 IPR011576 -
Vivi7g02283 708 Gene3D MFS general substrate transporter like domains 439 532 IPR036259 -
Vivi7g02283 708 MobiDBLite consensus disorder prediction 1 32 - -
Vivi7g02283 708 Gene3D - 384 438 IPR012349 -
Vivi7g02283 708 Pfam WD domain, G-beta repeat 586 604 IPR001680 GO:0005515
Vivi7g02283 708 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 57 140 IPR001179 GO:0003755
Vivi7g02283 708 SUPERFAMILY DPP6 N-terminal domain-like 579 694 - -
Vivi7g02283 708 SUPERFAMILY FKBP-like 34 142 - -
Vivi7g02283 708 Gene3D - 533 703 IPR015943 GO:0005515
Vivi7g02283 708 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 168 259 IPR001179 GO:0003755
Vivi7g02283 708 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 165 256 IPR001179 GO:0003755
Vivi7g02283 708 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 52 137 IPR001179 GO:0003755
Vivi7g02283 708 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 283 358 IPR001179 GO:0003755
Vivi7g02283 708 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 287 352 IPR001179 GO:0003755
Vivi7g02283 708 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 25 142 - -
Vivi7g02283 708 Pfam RPN1 N-terminal domain 353 397 IPR040892 -
Vivi7g02283 708 Gene3D - 142 259 IPR046357 GO:0003755
Vivi7g02283 708 SMART WD40_4 572 613 IPR001680 GO:0005515
Vivi7g02283 708 SMART WD40_4 615 654 IPR001680 GO:0005515
Vivi7g02283 708 SMART WD40_4 657 696 IPR001680 GO:0005515
Vivi7g02283 708 SUPERFAMILY FMN-binding split barrel 395 437 - -
Vivi7g02283 708 Pfam Sugar (and other) transporter 452 534 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vivi7g02283 708 Gene3D - 5 141 IPR046357 GO:0003755
Vivi7g02283 708 Gene3D - 261 371 IPR046357 GO:0003755
Vivi7g02283 708 SUPERFAMILY FKBP-like 264 358 - -
Vivi7g02283 708 SUPERFAMILY MFS general substrate transporter 446 535 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02283 Vivi-Chr7 85823285 85825411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02283 27 358 Calmodulin-binding Proteins AT3G25230 50.000 2.29e-98 312