Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02238 ATGGCTTCGTTTTGTTCTAGCATGAGTAGTAATTTTATCATTGGTTTTTCTCTTTTGGTTCTCGTGTTAATGGGGAGTGCAAATGCTTCACTTTCGAAAGATTATTATTATAGTTCTTGTCCAAAACTCTTTGAAACTGTGAAGTGCACGGTTGAATCCGCCATAGCAAAAGAGACTCGCATGGGCGCTTCTCTTCTGCGTTTGTTCTTCCATGATTGTTTTGTTAATGGATGTGATGGTTCGATTTTGCTCGATGACACATCGAGCATTACGGGAGAGAAAAATGCAAGACCAAACCAAAATTCTGCGCGTGGATTTGAAGTGATAGATCAAATTAAGTTAGCAGTGGAGCAAGTATGCCCGGGTGTAGTCTCTTGTGCTGATATCCTCGCTGTTACTGCTAGAGACTCTGTTGAAATCCTTGGAGGTCCAAGTTGGGATGTGAAACTTGGAAGAAGAGACGCTAGAACGGCTAGTCAATCAGCTGCAAACAATGGCATCCCAGCACCAACTTCAAGCCTCAATCAACTCATCTCAAGATATAATGCTCTTGGTCTTTCCGCCAAAGATTTGGTCGCATTGTCTGGTGGTCACACAATTGGACAAGCGAAATGCACAACCTTTAGAGGCCATATTTACAACGACACCAACATCGACACTTCCTTTGCTCGCACAAGGCAATCAGGATGCCCTAAGCCATCCGGGTCGGGAGACAATAACTTGGCACCCCTCGATCTCGCGACACCAACATCTTTTGACAATCATTACTTCAAGAATCTTGTTGACATTAAGGGGCTACTCCACTCTGACCAAGAACTCTTCAATGGTGGATCCACTGATTCCATAGTCCATGAATATAGCATAAATCCAAACGCTTTTTTCTCTGATTTCGTCGATGCCATGATCAAGATGGGAGACATTAGTCCTCTAACTGGTTCAAATGGTGAGATAAGAAAGAATTGCAGGATTGTGAATTCATCAAGTTAA 987 0.4286 MASFCSSMSSNFIIGFSLLVLVLMGSANASLSKDYYYSSCPKLFETVKCTVESAIAKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSITGEKNARPNQNSARGFEVIDQIKLAVEQVCPGVVSCADILAVTARDSVEILGGPSWDVKLGRRDARTASQSAANNGIPAPTSSLNQLISRYNALGLSAKDLVALSGGHTIGQAKCTTFRGHIYNDTNIDTSFARTRQSGCPKPSGSGDNNLAPLDLATPTSFDNHYFKNLVDIKGLLHSDQELFNGGSTDSIVHEYSINPNAFFSDFVDAMIKMGDISPLTGSNGEIRKNCRIVNSSS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02238 328 Gene3D - 34 325 - -
Vivi7g02238 328 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 Gene3D Peroxidase, domain 2 168 304 - -
Vivi7g02238 328 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Vivi7g02238 328 Pfam Peroxidase 48 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 SUPERFAMILY Heme-dependent peroxidases 31 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Vivi7g02238 328 FunFam Peroxidase 168 304 - -
Vivi7g02238 328 FunFam Peroxidase 34 176 - -
Vivi7g02238 328 PANTHER PEROXIDASE 72-RELATED 28 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 ProSiteProfiles Plant heme peroxidase family profile. 30 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi7g02238 328 CDD secretory_peroxidase 31 324 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02238 Vivi-Chr7 85290667 85292265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02238 29 321 Peroxidase AT5G05340 72.014 7.60e-160 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02238 K00430 - gmx:100803637 518.85