Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02234 ATGGTTTCTAGGGAGCAAAAGAGAGCAGCACTGCATGAGAAGCTGCAACTTCTTCGTTCTGTAACTAACTCTCATGCTATAACTGATACCTCGATTGTAATCGATGCATCAAAGTATATCGAAAATCTAAAGGAAAAGGTAGAAAGACTAAATGAAGAAATAGCTTCTGCAGAAAGTTCAAGTGTTCATAATCCCTTGCCTATGATTACAGTGGAAACCCTAGAAAAAGGATTTCTTATAAATGTTTTTTCAGCCAAAAGCAGCCAAGGTATGCTTGTTTCAATACTTGAAGCCATTGAAGAGATGAGACTTACAGTTCTGGAAGCTAGGGTTTCTTGTACAGACAATTTCCGATTCCAAGCTGTTGGAGGAGAGAATGAAGAACAAGGAGAGACCATTGATGCACAAGCTGTGAAACAAGCTGTAGGACAAGCAATAAAAAATTGGAGTGAAAATTCTGATCAAGTGTAA 471 0.3822 MVSREQKRAALHEKLQLLRSVTNSHAITDTSIVIDASKYIENLKEKVERLNEEIASAESSSVHNPLPMITVETLEKGFLINVFSAKSSQGMLVSILEAIEEMRLTVLEARVSCTDNFRFQAVGGENEEQGETIDAQAVKQAVGQAIKNWSENSDQV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02234 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 151 - -
Vivi7g02234 156 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02234 Vivi-Chr7 85223672 85225704 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02234 11 142 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.167 1.32e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02234 - - tpra:123919440 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02381 6 104385578 104387905 Vivi7g02234 7 85223672 85225704 ECH
Vivi7g02234 7 85223672 85225704 Vivi7g02234 7 85223672 85225704 ECH