Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02228 ATGATGGCATTATCGTCTTTCAAATACTTCAATAAATACAAATTCCCTATAAAAACTTCATCTGGCAAAAAACAAGACAAAACAGCAACAACACTTTCTCAAAACTTTTCTTCCATTGTCGCCGGAATGTCGCCGGTTATCGGAGCAAACGCGCCTCTCTTGTCAGGATCCAATCCTACTTCGAAACCCGCAACGGTGTCAGGTGCAGTGTTCAATGTCGCAACAAGCGTAATTGGCGCCGGAATTATGTCTCTTCCGGCGACTCTGAAGGTTCTCGGTGTGATTCCGGCGTTAGTTTTGATTCTGGTGATAGCTTTACTGGCTGAAATTTCTGTTGAATTTTTAATGAGGTTTACGCGTTCGGGTGAAACCACGACGTATTCTGGAGTTATGAGAGAAGCTTTTGGCCCCTTAGGAGCTGCTGCATCTCGACTTGCCGTTGTGATTAATAATATGGGGTGTTTAATTATGTACCAAATTATTATGGCGGATGTATTTTCTGGAAATAATCCTGAAGGAGAAGTACATTTGGGTGTTTTGCAACAATGGTTTGGGGTTCATTGGTGGAATTCAAGAGAGTTTGCTTTAATATTTACCATGATCTTCATTTTGTTTCCATTGGTATTGTACCGACGCGTAGAGTCATTGAAGTTCAGTTCTGCAGTAGCAACTCTTCTGGCTGTGGCATTTGTTACAATATGTTCTGTGTCGGCAATTATTGCTCTTGCCGAAGGAAAAACACAGACACCTAGACTGGTCCCTCGTTTGGACACACATTCATCTTTCTTTGATCTTTTCACTGCAGTTCCGGTCATTGTAGCATCCTACACATTTCATTTTAATGTTCATCCAATTGGATTTGAGCTTGGAAAACCATCACAACTGACAAAAGCAGTTAGAATAGCACTAATCCTATGTGCACTAATATACTTCTCAATCGGTCTATTTGGTTACCTTTTATTCGGCGATTCAACTCAATCAGACATTCTAATCAATTTCGACCGAAGTGCTGATTCATCTTTCGGTCATTTGCTCAATACTTTGGTCCGTTTAAGCTATGCTTTACATATCTTGTTGACATTTCCTGTCCTGAACTTTTCATTGAGAACCAACGTTGATGAATTTCTATTCCCTAAAAAGCCTTTGTTAGCCACAGATAACAAGAGGTTTATGATCTTGACACTCGCTCTGTTGGCTCTTAGTTACACTGCTGCTGTAGCGATTCCGGATATTTGGTACATTTTTCAGTTTATGGGATCAACCTCATCTGTTTGTCTTTCCTTTGTTTTCCCTGGTTCTATTGTTTTAAGGGATATTCATGGTATTTCAACGAGAAAGGACAAGATTATAGCACTTGTTATGGTTATACTAGCCGTAGGAACAAGTGTGACTGCTATGTCCAATAACATCTATAAGCTGTTTTAG 1425 0.4 MMALSSFKYFNKYKFPIKTSSGKKQDKTATTLSQNFSSIVAGMSPVIGANAPLLSGSNPTSKPATVSGAVFNVATSVIGAGIMSLPATLKVLGVIPALVLILVIALLAEISVEFLMRFTRSGETTTYSGVMREAFGPLGAAASRLAVVINNMGCLIMYQIIMADVFSGNNPEGEVHLGVLQQWFGVHWWNSREFALIFTMIFILFPLVLYRRVESLKFSSAVATLLAVAFVTICSVSAIIALAEGKTQTPRLVPRLDTHSSFFDLFTAVPVIVASYTFHFNVHPIGFELGKPSQLTKAVRIALILCALIYFSIGLFGYLLFGDSTQSDILINFDRSADSSFGHLLNTLVRLSYALHILLTFPVLNFSLRTNVDEFLFPKKPLLATDNKRFMILTLALLALSYTAAVAIPDIWYIFQFMGSTSSVCLSFVFPGSIVLRDIHGISTRKDKIIALVMVILAVGTSVTAMSNNIYKLF 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02228 474 PANTHER AMINO ACID TRANSPORTER 57 460 - -
Vivi7g02228 474 Pfam Transmembrane amino acid transporter protein 64 463 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02228 Vivi-Chr7 85138016 85140108 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02228 43 473 Amino Acid or Auxin Permease AAAP Family AT3G56200 58.065 1.32e-177 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02228 - - tpra:123881388 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02228 7 85138016 85140108 Vivi3g04391 3 79013240 79015324 PCT