Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02226 ATGTCAAATTCAACTTCCGAATATGTCACCCCTCTTCTCCCTCAGAACAGCGAAACCCCCCAACATGACCCAATTCCACAAAATGGATCAATCTCCGGGGCAGTCTTCAACATCTCAACCACCATGGTTGGTGCCGGAATCATGTCGATTCCGGCGACCATGAAAGTCCTCGGCATAATTCCGGGGCTAATTGTGATCGTGTTGGTGGCGGTTATAACGGATTTAACGGTTGAGTTTATGTTGAGGTGTACAAGCTCTGGTAAAGCGGTTACTTATGCGGGTATGGTGGGTGAGTCGTTTGGTTGGGGTGGATCTCTTGCTGTTAAGATTTGTGTTATTACCACTAATCTTGGTGTTCTCATCGTTTATTTAATCATTCTTGGAGATGTTCTATGTGGAAATGAGTACGAAGGAACCATACATTTAGGTATTCTACAACAATGGTTTGGCATCCACTGGTGGACATCTCGCACTTTTGCTCTTCTTATCGTCGCACTTGTCATAATGCTCCCTCTAGTAATGTTACGCCGTGTAGATTCACTCAAGTATAGCTCTGCATTATCGATTCTTTTAGCATTGGTTTTTGTTGTAATATGCTCCTCCATGGCAGTTACTGCATTATCGTCCGGGAAAACTCAGTCGGTGAGAATATTTCCCGATTTCTCTCAAGTCACTGCCCTTGATCTTTTCACCACTGTCCCTATTTTTGTAACCGGCTTTGGATTCCATGTCAATGTTCATCCTATTAGAGCAGAGCTTGTAAAACCTACAGACATGAGTTCTGCCGTGCGAATTTCGTTGTTAATCTCCGTTGCCATTTACTTCGCTATTGGATTCTTCGGATACCTATTGTTCGGCGACTCTATCATGCCGGACGTTTTAGTAAACTTCGACCAGAACTCAGATTCAAGTTTCGGTCGATGGCTAGACAACGTTATTCGGCTAAGTTACGCCCTCCATCTCGCACTTGTATTCCCCATCATGAACTATTCTTTGAGGGCCAATATCGATGAACTATTATTCACAAAGAAAAATAAGGCTCCTTTGGCTTTGGACACTCCAAGATTTGTGTCACTAACTCTTGTTTTGTTAGCTTTCACATATTTGGTGGCTGTGGCTATTCCAAATGTTTGGTACTTTTTTCAGTTCTTGGGATCTACTACCATTGTTTGCCTCTCATTCATCTTCCCTGCTGCAATCATACTAAGGGATATGCATGGTATATCAAAAACAAGAGATAAAGTAATGGCAATAGTGGTGATTATTTTGGCTGTTGGGACAAGTGGAATTGCTATATGGACCAACTTGAATGGTTCAAGTGCTGATTAA 1329 0.4244 MSNSTSEYVTPLLPQNSETPQHDPIPQNGSISGAVFNISTTMVGAGIMSIPATMKVLGIIPGLIVIVLVAVITDLTVEFMLRCTSSGKAVTYAGMVGESFGWGGSLAVKICVITTNLGVLIVYLIILGDVLCGNEYEGTIHLGILQQWFGIHWWTSRTFALLIVALVIMLPLVMLRRVDSLKYSSALSILLALVFVVICSSMAVTALSSGKTQSVRIFPDFSQVTALDLFTTVPIFVTGFGFHVNVHPIRAELVKPTDMSSAVRISLLISVAIYFAIGFFGYLLFGDSIMPDVLVNFDQNSDSSFGRWLDNVIRLSYALHLALVFPIMNYSLRANIDELLFTKKNKAPLALDTPRFVSLTLVLLAFTYLVAVAIPNVWYFFQFLGSTTIVCLSFIFPAAIILRDMHGISKTRDKVMAIVVIILAVGTSGIAIWTNLNGSSAD 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02226 442 PANTHER AMINO ACID TRANSPORTER 24 426 - -
Vivi7g02226 442 Pfam Transmembrane amino acid transporter protein 28 425 IPR013057 -
Vivi7g02226 442 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02226 Vivi-Chr7 85117087 85120432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02226 5 442 Amino Acid or Auxin Permease AAAP Family AT3G56200 50.797 1.49e-152 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02226 - - gmx:100794031 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02226 7 85117087 85120432 Vivi7g02226 7 85117087 85120432 ECH
Vivi3g04391 3 79013240 79015324 Vivi7g02226 7 85117087 85120432 PCT