Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02215 ATGTGCATTCATGCAACTACTTTTGGTCAAGATTTTATTTCCAAGTCAATCACATTTAAGAACACAACAGGTCCACAAGGTGAGCAAGCCGTAGCACTTTATGTCGCTGCTACTTTTGGTCAAGATTTTCTGGCCAAGTCAATCACATTTGAGAACACAACTTGTCCAGAAGGAAAGCAAGCGGTAGCACTTTATGTCGCTGGTGACCGATCTACTTTTTTCGATTGTGAAATTCGAGGATATCAAGACACGTTATGTGTAGAAAAAGGTCAGAAATTTTACCACAATTATTCAATCTCCGGAACGGTTGATTTTATCTTCGTCCAAACCAGTTCCACCTTGATCCAGAATTCAATGATATTGGTGAGGAAGCCTGACCCAAGACAACAAAACATCATAGTTGCAAGTGGCCGATACAACAACAATCACACTGCTAGAATAATACTCCAAAACCGTGTCATCATGCCGGACAGAGAACTTATACCATATCTATTGACGGTAAGGACTTATTTGGCAAGGCCATGGGGAAATTTTTCCAGAGCTGTTTTTATAAACAATAATATTGGCAACTTTATACAACAGGAATGGTTTTTACCTTGGAATCCAACTGTTCCATATACTGAAAACTGTTATTTTGCTGAGTTTAACAATAATGGACCTGGTGCTGATGTTAGAGGAAGAGTGAAATGGGTAGGAGGCCTAATTACCAAAGACGAAGCCACTCAATTCACAGCAGAACCATGGCTTCATGCTAATGCTTGGTTACCTTCCACAGGAATTCCTTACACTCCGGGATTTCAGACTTAA 807 0.4002 MCIHATTFGQDFISKSITFKNTTGPQGEQAVALYVAATFGQDFLAKSITFENTTCPEGKQAVALYVAGDRSTFFDCEIRGYQDTLCVEKGQKFYHNYSISGTVDFIFVQTSSTLIQNSMILVRKPDPRQQNIIVASGRYNNNHTARIILQNRVIMPDRELIPYLLTVRTYLARPWGNFSRAVFINNNIGNFIQQEWFLPWNPTVPYTENCYFAEFNNNGPGADVRGRVKWVGGLITKDEATQFTAEPWLHANAWLPSTGIPYTPGFQT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02215 268 PANTHER PECTINESTERASE 7 37 - -
Vivi7g02215 268 Pfam Pectinesterase 37 251 IPR000070 GO:0030599|GO:0042545
Vivi7g02215 268 SUPERFAMILY Pectin lyase-like 38 265 IPR011050 -
Vivi7g02215 268 Gene3D - 36 268 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02215 Vivi-Chr7 84950696 84952718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02215 34 266 Carbohydrate Esterase AT4G33220 42.857 1.57e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02215 K01051 - gmx:100775225 264.233