Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02208 ATGGACACTCACAACAACACTCACCATATGACAAATGCAGCAATTAAAAGAAACAATTTTTACAGGCTATTTTCCATTTTCATCATCTGGGTCCATTTCATAATGATCCCAGTTTCATGTGAAGAACATTGGGATGGAGTTGTTGTAACACAGTCAAACTTCCTAGCACTTCAAGCCTTCAAGCAAGAGCTAATTGATCCAGAAGGGTTCTTGAAAACATGGAATGATAGCGGCTTTGGAGCATGTTCAGGAGCTTGGGTTGGAATCAAGTGTGCTCAAGGACAAGTCATTGTGATCCAGCTTCCATGGAAAGGGCTAAAGGGACAAATCACTGAAAGAATAGGTCAACTTCAAGGTCTTAGAAAGCTTAGTCTTCATAACAACCACATCACTGGCTCAATCCCTTCATCATTAGGACTTCTTAACAACCTAAGAGGAGTTCAGCTTTTCAACAACAGGTTAACAGGTTCAATCCCTTCTTCATTAGGTTCTTGTCCTTTGCTTCAATCTTTGGATTTCAGTAACAATTTGCTCACAGGTGAAATCCCTGAGAGTTTTGGAAATTCCTCTAAGCTTTATTGGCTTAACTTGAGCTTCAATTCTTTGTCTGGTTCAATACCAAGCAGTCTCACTAGTTTGAATTCTCTCACTTTTTTGTCCCTTCAACATAACAATCTCTCAGGTTCTATTCCTAGTTTGAAAATTGGATTATCTAGGCTTCAAAATCTTGTCTTGGATCATAACTTCTTGACTGGAACCATTCCTGGTTCTTTAGGTGATTTAAGGGAGCTTAGAGAGATTTCTCTTAGTCATAACCGTTTTAGTGGTCACATTCCTCAAAGTATTGGAAAGATTTCAAATCTTAAGCAGCTTGATTTGTCACTGAATAATCTCAGTGGAGAAATTCCTGTCTCATTTGATAATCTACTTATTCTTAATTCCTTCAATGTTTCTTATAATAATCTTTCTGGTCATGTTCCATCTTTGCTAGCACAGAAATTTAACTCAAGTTCATTTGTGGGAAATGTTCAACTATGTGGTTATAGTCCTTCAACTCAATGTTCCTCTCCAGCTCCTTCAGAAGGACTAGGTGCACCTTCTGAAGTACCGAAACACGGCCGTCATAAGAAACTCGGTACCAAAGACATTATCCTCATTGTAGCAGGAGTGTTGCTTGTAGTCCTGATAACAGTATGCTGTATCCTGCTTTTCTGTCTGTTCCGGAAAAGAAAAACATCGAATGGTGCCGAGGAGGGACACATTACTGCGAGATCAGCCGCGGCTGCTGCCAGGGCAGGAAAAGGAGTCCCTCCTGTCGCCGGAGAAGTTGAAGCGGGCGGTGATGCAGGAGGCAAACTAGTACATTTTGATGGTCCGCTCGCTTTTACGGCCGACGATCTCTTGTGTGCAACTGCTGAGATAATGGGAAAGAGCACCTATGGAACAGTGTATAAGGCAACATTAGAAGATGGTAGTCAAGCTGCAGTGAAAAGGTTGAGGGAGAAAATCACTAAGAATCAGAGAGAATTTGAATCTGAAGTTAGTATTCTAGGGAGAATTCGACACGAAAATCTTTTGGCAATGAGAGCCTATTACTTAGGACCTAAAGGAGAAAAGCTTCTGGTTTTTGATTACATGCCTAAAGGAAGTCTTGCTTCTATCCTACATGCTCATGGACCTGAAACAAGAATTGATTGGGCAACAAGGATGAACATAGCACAAGGCATGGCGCGCGGCATGTTATACCTACATTCGCACGAAAACATCATACATGGGAACCTAACATCAAGCAATGTGTTACTTGATGAGCACACAAATGCCAAAATAGCAGACTTTGGTCTATCAAGGTTGATGACCACAGCTGCTAACTCTAATGTGATTGCCACGGCCGGTGCATTAGGATACCGAGCGCCCGAGCTCTCGAAGCTAAAGAAAGCGAACACGAAAACTGATGTATACAGTCTTGGTGTAATCTTGTTAGAACTACTAACAAGAAAGCCACCTGGTGAGGCAATGAATGGTGTTGATTTACCTCAATGGGTTGCCTCTATTGTTAAAGAGGAGTGGACTAATGAGGTTTTTGATGTTGATTTGATGAGAGATTCTTCAACAAATGGTGATGAGTTGTTGAACACTTTGAAACTTGCTTTGCATTGTGTTGATCCTTCTCCATCAGCACGACCGGAAGTTCAGATGATACTTCAACAGCTAGAAGAGATTAGACCACAGATGTTATCATCAGCAGCCATTTCTAGTGATGAAGGGGCCATTCCTACAAGTGAATGA 2286 0.4134 MDTHNNTHHMTNAAIKRNNFYRLFSIFIIWVHFIMIPVSCEEHWDGVVVTQSNFLALQAFKQELIDPEGFLKTWNDSGFGACSGAWVGIKCAQGQVIVIQLPWKGLKGQITERIGQLQGLRKLSLHNNHITGSIPSSLGLLNNLRGVQLFNNRLTGSIPSSLGSCPLLQSLDFSNNLLTGEIPESFGNSSKLYWLNLSFNSLSGSIPSSLTSLNSLTFLSLQHNNLSGSIPSLKIGLSRLQNLVLDHNFLTGTIPGSLGDLRELREISLSHNRFSGHIPQSIGKISNLKQLDLSLNNLSGEIPVSFDNLLILNSFNVSYNNLSGHVPSLLAQKFNSSSFVGNVQLCGYSPSTQCSSPAPSEGLGAPSEVPKHGRHKKLGTKDIILIVAGVLLVVLITVCCILLFCLFRKRKTSNGAEEGHITARSAAAAARAGKGVPPVAGEVEAGGDAGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKNQREFESEVSILGRIRHENLLAMRAYYLGPKGEKLLVFDYMPKGSLASILHAHGPETRIDWATRMNIAQGMARGMLYLHSHENIIHGNLTSSNVLLDEHTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTRKPPGEAMNGVDLPQWVASIVKEEWTNEVFDVDLMRDSSTNGDELLNTLKLALHCVDPSPSARPEVQMILQQLEEIRPQMLSSAAISSDEGAIPTSE 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02208 761 ProSiteProfiles Leucine-rich repeat profile. 119 141 IPR001611 GO:0005515
Vivi7g02208 761 Gene3D Ribonuclease Inhibitor 235 356 IPR032675 -
Vivi7g02208 761 ProSiteProfiles Protein kinase domain profile. 469 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02208 761 CDD STKc_IRAK 475 740 - -
Vivi7g02208 761 SUPERFAMILY L domain-like 52 346 - -
Vivi7g02208 761 FunFam Leucine-rich repeat receptor-like protein kinase 454 545 - -
Vivi7g02208 761 Pfam Leucine rich repeat N-terminal domain 55 91 IPR013210 -
Vivi7g02208 761 Pfam Protein tyrosine and serine/threonine kinase 472 737 IPR001245 GO:0004672|GO:0006468
Vivi7g02208 761 Gene3D Transferase(Phosphotransferase) domain 1 547 754 - -
Vivi7g02208 761 SUPERFAMILY Protein kinase-like (PK-like) 473 742 IPR011009 -
Vivi7g02208 761 Gene3D Phosphorylase Kinase; domain 1 475 546 - -
Vivi7g02208 761 FunFam Pollen receptor-like kinase 1 546 750 - -
Vivi7g02208 761 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 232 354 - -
Vivi7g02208 761 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 180 740 - -
Vivi7g02208 761 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 50 211 - -
Vivi7g02208 761 Gene3D Ribonuclease Inhibitor 167 234 IPR032675 -
Vivi7g02208 761 Gene3D Ribonuclease Inhibitor 52 166 IPR032675 -
Vivi7g02208 761 Pfam Leucine rich repeat 167 226 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02208 Vivi-Chr7 84901047 84903982 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02208 44 742 Receptor kinase-like Gene Family AT3G51740 57.548 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi7g02208 PK_Tyr_Ser-Thr 8.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02208 - - twl:120012031 962.214