Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02207 ATGACAAATGCAGCAATTAAAAGAAACAATTTTTACAGGCTATTTTCCATTTTCATCATCTGGGTCCATTTCATAATGATCCCAGTTTCATGTGAAGAACATTGGGATGGAGTTGTTGTAACACAGTCAAACTTCCTAGCACTTCAAGCCTTCAAGCAAGAGCTAATTGATCCAGAAGGGTTCTTGAAAACATGGAATGATAGCGGCTTTGGAGCATGTTCAGGAGCTTGGGTTGGAATCAAGTGTGCTCAAGGACAAGTCATTGTGATCCAGCTTCCATGGAAAGGGCTAAAGGGACAAATCACTGAAAGAATAGGTCAACTTCAAGGTCTTAGAAAGCTTAGTCTTCATAACAACCACATCACTGGCTCAATCCCTTCATCATTAGGACTTCTTAACAACCTAAGAGGAGTTCAGCTTTTCAACAACAGGTTAACAGGTTCAATCCCTTCTTCATTAGGTTCTTGTCCTTTGCTTCAATCTTTGGATTTCAGTAACAATTTGCTCACAGGTGAAATCCCTGAGAGTTTTGGAAATTCCTCTAAGCTTTATTGGCTTAACTTGAGCTTCAATTCTTTGTCTGGTTCAATACCAAGCAGTCTCACTAGTTTGAATTCTCTCACTTTTTTGTCCCTTCAACATAACAATCTCTCAGGTTCTATTCCTAGTTTGAAAATTGGATTATCTAGGCTTCAAAATCTTGTCTTGGATCATAACTTCTTGACTGGAACCATTCCTGGTTCTTTAGGTGATTTAAGGGAGCTTAGAGAGATTTCTCTTAGTCATAACCGTTTTAGTGGTCACATTCCTCAAAGTATTGGAAAGATTTCAAATCTTAAGCAGCTTGATTTGTCACTGAATAATCTCAGTGGAGAAATTCCTGTCTCATTTGATAATCTACTTATTCTTAATTCCTTCAATGTTTCTTATAATAATCTTTCTGGTCATGTTCCATCTTTGCTAGCACAGAAATTTAACTCAAGTTCATTTGTGGGAAATGTTCAACTATGTGGTTATAGTCCTTCAACTCAATGTTCCTCTCCAGCTCCTTCAGAAGGACTAGGTGCACCTTCTGAAGTACCGAAACACGGCCGTCATAAGAAACTCGGTACCAAAGACATTATCCTCATTGTAGCAGGAGTGTTGCTTGTAGTCCTGATAACAGTATGCTGTATCCTGCTTTTCTGTCTGTTCCGGAAAAGAAAAACATCGAATGGTGCCGAGGAGGGACACATTACTGCGAGATCAGCCGCGGCTGCTGCCAGGGCAGGAAAAGGAGTCCCTCCTGTCGCCGGAGAAGTTGAAGCGGGCGGTGATGCAGGAGGCAAACTAGTACATTTTGATGGTCCGCTCGCTTTTACGGCCGACGATCTCTTGTGTGCAACTGCTGAGATAATGGGAAAGAGCACCTATGGAACAGTGTATAAGGCAACATTAGAAGATGGTAGTCAAGCTGCAGTGAAAAGGTTGAGGGAGAAAATCACTAAGAATCAGAGAGAATTTGAATCTGAAGTTAGTATTCTAGGGAGAATTCGACACGAAAATCTTTTGGCAATGAGAGCCTATTACTTAGGACCTAAAGGAGAAAAGCTTCTGGTTTTTGATTACATGCCTAAAGGAAGTCTTGCTTCTATCCTACATGCTCATGGACCTGAAACAAGAATTGATTGGGCAACAAGGATGAACATAGCACAAGGCATGGCGCGCGGCATGTTATACCTACATTCGCACGAAAACATCATACATGGGAACCTAACATCAAGCAATGTGTTACTTGATGAGCACACAAATGCCAAAATAGCAGACTTTGGTCTATCAAGGTTGATGACCACAGCTGCTAACTCTAATGTGATTGCCACGGCCGGTGCATTAGGATACCGAGCGCCCGAGCTCTCGAAGCTAAAGAAAGCGAACACGAAAACTGATGTATACAGTCTTGGTGTAATCTTGTTAGAACTACTAACAAGAAAGCCACCTGGTGAGGCAATGAATGGTGTTGATTTACCTCAATGGGTTGCCTCTATTGTTAAAGAGGAGTGGACTAATGAGGTTTTTGATGTTGATTTGATGAGAGATTCTTCAACAAATGGTGATGAGTTGTTGAACACTTTGAAACTTGCTTTGCATTGTGTTGATCCTTCTCCATCAGCACGACCGGAAGTTCAGATGATACTTCAACAGCTAGAAGAGATTAGACCACAGATGTTATCATCAGCAGCCATTTCTAGTGATGAAGGGGCCATTCCTACAAGTGAATGA 2259 0.413 MTNAAIKRNNFYRLFSIFIIWVHFIMIPVSCEEHWDGVVVTQSNFLALQAFKQELIDPEGFLKTWNDSGFGACSGAWVGIKCAQGQVIVIQLPWKGLKGQITERIGQLQGLRKLSLHNNHITGSIPSSLGLLNNLRGVQLFNNRLTGSIPSSLGSCPLLQSLDFSNNLLTGEIPESFGNSSKLYWLNLSFNSLSGSIPSSLTSLNSLTFLSLQHNNLSGSIPSLKIGLSRLQNLVLDHNFLTGTIPGSLGDLRELREISLSHNRFSGHIPQSIGKISNLKQLDLSLNNLSGEIPVSFDNLLILNSFNVSYNNLSGHVPSLLAQKFNSSSFVGNVQLCGYSPSTQCSSPAPSEGLGAPSEVPKHGRHKKLGTKDIILIVAGVLLVVLITVCCILLFCLFRKRKTSNGAEEGHITARSAAAAARAGKGVPPVAGEVEAGGDAGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKNQREFESEVSILGRIRHENLLAMRAYYLGPKGEKLLVFDYMPKGSLASILHAHGPETRIDWATRMNIAQGMARGMLYLHSHENIIHGNLTSSNVLLDEHTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTRKPPGEAMNGVDLPQWVASIVKEEWTNEVFDVDLMRDSSTNGDELLNTLKLALHCVDPSPSARPEVQMILQQLEEIRPQMLSSAAISSDEGAIPTSE 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02207 752 Pfam Protein tyrosine and serine/threonine kinase 463 728 IPR001245 GO:0004672|GO:0006468
Vivi7g02207 752 Gene3D Transferase(Phosphotransferase) domain 1 538 745 - -
Vivi7g02207 752 CDD STKc_IRAK 466 731 - -
Vivi7g02207 752 SUPERFAMILY L domain-like 43 337 - -
Vivi7g02207 752 Gene3D Ribonuclease Inhibitor 158 225 IPR032675 -
Vivi7g02207 752 Gene3D Ribonuclease Inhibitor 43 157 IPR032675 -
Vivi7g02207 752 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 228 731 - -
Vivi7g02207 752 Pfam Leucine rich repeat 158 217 IPR001611 GO:0005515
Vivi7g02207 752 FunFam Leucine-rich repeat receptor-like protein kinase 445 536 - -
Vivi7g02207 752 Pfam Leucine rich repeat N-terminal domain 46 82 IPR013210 -
Vivi7g02207 752 ProSiteProfiles Protein kinase domain profile. 460 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02207 752 SUPERFAMILY Protein kinase-like (PK-like) 464 733 IPR011009 -
Vivi7g02207 752 ProSiteProfiles Leucine-rich repeat profile. 110 132 IPR001611 GO:0005515
Vivi7g02207 752 Gene3D Phosphorylase Kinase; domain 1 466 537 - -
Vivi7g02207 752 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 223 345 - -
Vivi7g02207 752 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 41 202 - -
Vivi7g02207 752 Gene3D Ribonuclease Inhibitor 226 347 IPR032675 -
Vivi7g02207 752 FunFam Pollen receptor-like kinase 1 537 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02207 Vivi-Chr7 84901047 84910002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02207 35 733 Receptor kinase-like Gene Family AT3G51740 57.548 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi7g02207 PK_Tyr_Ser-Thr 8.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02207 - - twl:120012031 962.214