Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02203 ATGGGTGCTACTGTTTATGATCAAAGTTTTAATGTTAATCTTGCGCCTTTGGAACCATCTAGAAAGAGGAAAACTAGGAGTAGAGGAAAGGGGACTAAATCTGTTGCTGAGATTCTAGCGAAGTGGAGGGAATACAATGAACATCTTTATGCAGAGGGTGGTAAACCGAAGCGGAAAGCGCCGGCGAAAGGTTCGAAGAAAGGGTGTATGAAAGGGAAAGGAGGGCCTCAAAATTCAGAGAATAGATATAGAGGTGTTAGACAGAGGACTTGGGGGAAATGGGTTGCTGAGATTAGGGAACCGAATAGAGGGAGTAGGCTTTGGTTAGGTACTTTTCCTACTGCTCAAGAAGCTGCTCTTGCTTATGATTATGCTGCGAGAGCTATGTATGGTCCTTCGGCGCGGCTTAATTTTCCTCATATATCGGATTATAGTTCTATTTGTGAATCTTTGAAGGACTCTTCTTTGGTTGCTGATAGCTGTCCTTGTTCTTCAGTGGCAACTTCTGAAACTGTGTCTAGTCATTCTGAGGTTTGCGCCCTTGATGATGTTAAGGAGATACCTAAACTACCCGTGTATATGAACAATACTGTTGATGTTTTTAATAAAGATTATGAAGTTTCGTCTCCGACTAGTAGAATGAAGCAAGAGCCAAAGGATGAGCATGTTCATATAATAGACCCTGGTATTGATGAAATCAAAGATGCTAAATCAGAAGGAATACAAACACAGACACAGGCACATGATGTTGTGCAGGTTGAAGAAGGTGTATGTAATGACCAGATGGATTTATCATGGATTGATAACTTTGACTTCAATGGTGATTGCTTGAAGAATTTTACAATGGATGAGTTTTTTCATGTGGATGAGCTTTTGGGACATATAGACAATAATCCAATAACTGATGAACATGGGATGATGCAAAATTTGGATTTTGGACAAATGAGTTTTCCTGAAGAGAGCAATCCTCAAGAGAGCCATCCTCAGGTTGGAACTGAAACTACTACTTCAAGCTTCTTTTATGAATTGGAAAATCCAGATGCTAAGCTGTTGGGGAGTCTGCCTCATATGGAGGAGAACACAACACCAGGTGTTGATTTTGGATTAGATTTCTTAAAAACAGAAGAGCCTGGGAACTATAATGATGCACTTGGAGATACACTATTTCCTGTTCTGGACTATGATGTGAATCATGCATCAAGGCCAATGTAA 1212 0.4035 MGATVYDQSFNVNLAPLEPSRKRKTRSRGKGTKSVAEILAKWREYNEHLYAEGGKPKRKAPAKGSKKGCMKGKGGPQNSENRYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAQEAALAYDYAARAMYGPSARLNFPHISDYSSICESLKDSSLVADSCPCSSVATSETVSSHSEVCALDDVKEIPKLPVYMNNTVDVFNKDYEVSSPTSRMKQEPKDEHVHIIDPGIDEIKDAKSEGIQTQTQAHDVVQVEEGVCNDQMDLSWIDNFDFNGDCLKNFTMDEFFHVDELLGHIDNNPITDEHGMMQNLDFGQMSFPEESNPQESHPQVGTETTTSSFFYELENPDAKLLGSLPHMEENTTPGVDFGLDFLKTEEPGNYNDALGDTLFPVLDYDVNHASRPM 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02203 403 MobiDBLite consensus disorder prediction 53 85 - -
Vivi7g02203 403 Gene3D AP2/ERF domain 81 140 IPR036955 GO:0003700|GO:0006355
Vivi7g02203 403 Pfam AP2 domain 82 131 IPR001471 GO:0003700|GO:0006355
Vivi7g02203 403 CDD AP2 82 140 IPR001471 GO:0003700|GO:0006355
Vivi7g02203 403 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 20 351 - -
Vivi7g02203 403 SMART rav1_2 82 145 IPR001471 GO:0003700|GO:0006355
Vivi7g02203 403 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Vivi7g02203 403 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Vivi7g02203 403 SUPERFAMILY DNA-binding domain 82 140 IPR016177 GO:0003677
Vivi7g02203 403 ProSiteProfiles AP2/ERF domain profile. 82 139 IPR001471 GO:0003700|GO:0006355
Vivi7g02203 403 FunFam Ethylene-responsive transcription factor 2 81 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02203 Vivi-Chr7 84825457 84827419 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02203 21 393 AP2-EREBP Transcription Factor Family AT2G40340 39.005 8.43e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vivi7g02203 AP2 1.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02203 - K09286 tpra:123924097 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02203 7 84825457 84827419 Vivi7g02203 7 84825457 84827419 ECH