Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02185 ATGATCAAGAACATGAATCTTTCTGCAGCTTTTTGGCATGTAGTTGTGTGGTTCTTGTTTCTTAACTTGAGTTTGTGCTGCTATTCTTTGAATGAAGAAGGTAATACTCTTTTGAAGATGAAGGAGAGAATAACTAGTGACCCTTTTGATGCTTTGTCAAATTGGGTTGATGATGGAGTTTCTCTTGACCCTTGTCATTGGTTTGGAGTTGAATGCTCAGATAGAGAAGTTGTTGTCCTGAATTTGAGAGACCTTTGCCTTGAAGGAACTTTGACACCAGAGCTTATGAACCTTGTTCACATAAAATCTATTATTTTAAGGAACAACTCTTTCTATGGGACCATACCTGAAGAAATTGTAGGCTTAAAAGAATTGGAGATTTTGGATTTGGGATATAACAACTTCAGTGGAAATCTAGATGCTAATTTTGGGCATAATATCTCATCACTAACAATTCTTTTGCTAGACAACAATGAGCACCTTTCTGGTTTCTCTCCGAAAATCAATGAACTGAAAATGCTCTCTGAGTGTCAAGTAGATGAAAATCAGTTCATCAATGCAGCTAACACGCCATCTTGTTCAGAAAGATCCATCAAATGGCGTGTTCGAGAAAATGAAGTTCCTAGGAGCCTGATGGAACATCGCGAACTACATCGTCGTCCTTATCATTACCATCGTAATCATACTTCGCCTCTCTTTAGACATTCTCCTTCACTTTCTCCATCGGTCGCTGAAGCACCACCAGTCCCGAGACCAGATTCTCCTGATCAAAATGCTTCTGATTCTCCAAATCAAAATGCCTCAGATTCTCCGGGCCAAAATGCTTCAGATTCTCCGAATCAAAATGCTTCCGATTCTCCTCCTCAAAGTATACCATCAAAGAAGAATCAAGTGCCTATTTTTGCCGGAGTTATTATCGGCAGTGCCATGTTTCTTGTTATTTCAACCATTGGTATATATCTTTGTAAGACCAACAAAGTATCTATTGTTAAACCTTGGACTACTGGAATAAGTGGACAGCTTCAAAAAGCACTTGTGACAGGTGTGCCAAAGCTAAAGAGAATAGATCTTGAAGCAGCATGTGAAGATTTTAGTAACGTAATCGGTAATTCGCCGATTGGTACATTGTACAAAGGAACTTTATCTAGTGGAGTTGAAATTGCTGTAGCTTCTGTTTCTATGAGATTATCCAAGACTTGGACAAAGAATTTAGAAGCTCAGTTTAAGAAGAAGATAGACACATTATCAAAAGTGAACCACAGGAATTTTGTCAATCTTATTGGATACTGTGAAGAAGAAGAACCTTTCACCAGAATGTTGGTTTTTGAGTATGCACCAAATGGAACGCTATTCGAGCATTTACACGTAAAAGAAGCTGAGCACTTGAGCTGGGGACCGAGACTTAGAATTGCGACGGGAATGGCTTACTGCCTACAACACATGCATGGATTAGACCCTCCTGTGGCCCTTACCAGTCTGAGTTCTTCAACTGTCCGTCTAACCGATGATCATGCTGCGAAGATTTCTGATTTGAGTTTCTCGCACGAGACAGATTCATCTGAAAAGAAACCTGATGGTAGAAAAGACATTGATATCGATAAGATGCAACCAACAAGTCCAGAGAGTAATGTTTATAACTTTGGTGTTTTGTTATTCGAGATAGTAACCGGTCGAATCCCTTATTCGGTTGATAATAGCTCAGCTGAAAACTGGGCATCACATTATCTAAAATGGGACAAACCTTTCAAGGAAATGGTGGATGCAGCTTTAGCATCGTACCAAGAGAATCAAGTGGAACAAGTTGCTGAGTTGATAAAAGATTGTGTCGATCCTGATCCGGAGAAGAGACCGAGAATGGATGAAGTGAGTGAGAGATTGAGAGAGATAACGAAAATGTCGCCTGAGTTTGTAGTTCCTAAACTTTCTCCACTTTGGTGGGCTGAGCTTGAGATTTCTTCTGCATAA 1965 0.398 MIKNMNLSAAFWHVVVWFLFLNLSLCCYSLNEEGNTLLKMKERITSDPFDALSNWVDDGVSLDPCHWFGVECSDREVVVLNLRDLCLEGTLTPELMNLVHIKSIILRNNSFYGTIPEEIVGLKELEILDLGYNNFSGNLDANFGHNISSLTILLLDNNEHLSGFSPKINELKMLSECQVDENQFINAANTPSCSERSIKWRVRENEVPRSLMEHRELHRRPYHYHRNHTSPLFRHSPSLSPSVAEAPPVPRPDSPDQNASDSPNQNASDSPGQNASDSPNQNASDSPPQSIPSKKNQVPIFAGVIIGSAMFLVISTIGIYLCKTNKVSIVKPWTTGISGQLQKALVTGVPKLKRIDLEAACEDFSNVIGNSPIGTLYKGTLSSGVEIAVASVSMRLSKTWTKNLEAQFKKKIDTLSKVNHRNFVNLIGYCEEEEPFTRMLVFEYAPNGTLFEHLHVKEAEHLSWGPRLRIATGMAYCLQHMHGLDPPVALTSLSSSTVRLTDDHAAKISDLSFSHETDSSEKKPDGRKDIDIDKMQPTSPESNVYNFGVLLFEIVTGRIPYSVDNSSAENWASHYLKWDKPFKEMVDAALASYQENQVEQVAELIKDCVDPDPEKRPRMDEVSERLREITKMSPEFVVPKLSPLWWAELEISSA 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02185 654 PANTHER PROTEIN MALE DISCOVERER 2 13 653 - -
Vivi7g02185 654 Gene3D Transferase(Phosphotransferase) domain 1 445 637 - -
Vivi7g02185 654 MobiDBLite consensus disorder prediction 255 294 - -
Vivi7g02185 654 FunFam Nuclear pore complex protein NUP107 30 189 - -
Vivi7g02185 654 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Vivi7g02185 654 MobiDBLite consensus disorder prediction 511 537 - -
Vivi7g02185 654 Pfam Protein tyrosine and serine/threonine kinase 365 626 IPR001245 GO:0004672|GO:0006468
Vivi7g02185 654 MobiDBLite consensus disorder prediction 227 294 - -
Vivi7g02185 654 Gene3D Ribonuclease Inhibitor 29 216 IPR032675 -
Vivi7g02185 654 ProSiteProfiles Protein kinase domain profile. 362 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02185 654 MobiDBLite consensus disorder prediction 511 535 - -
Vivi7g02185 654 FunFam Inactive receptor-like serine/threonine-protein kinase 336 444 - -
Vivi7g02185 654 Gene3D Phosphorylase Kinase; domain 1 336 444 - -
Vivi7g02185 654 SUPERFAMILY Protein kinase-like (PK-like) 360 646 IPR011009 -
Vivi7g02185 654 SUPERFAMILY L domain-like 37 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02185 Vivi-Chr7 84564378 84567957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02185 17 626 Receptor kinase-like Gene Family AT5G16000 25.312 2.90e-43 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Vivi7g02185 PK_Tyr_Ser-Thr 7.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02185 - - gmx:100820416 794.267