Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02182 ATGAAAGGCTATGAACCAAGGTCAAGTTCCTCTTGTGCAGCCTGCAAGTTTCTCAAAAGAAGATGCATACCAAATTGTATATTCGCACCCTACTTTCGCTCCGACGAGTGCAAGAAATTCGCCAAAGTCCACAAAGTTTTCGGAGCAAGCAATGTGAGCAAGATTCTGATCGAAGTTCCGGAGGAACAGAGGGAAGAAACTGTGAATTCTTTGGCTTATGAAGCTGATGCCAGGCTTAAAGATCCTGTTTATGGATGCATAGGTGCTATAGCGATTTTGCAAAGAAAGATGGTTGAGCTTCAACATGATCTTGCTGTGGCGAAGGATCGCCTCGCCTGTTGCGCTGCTGTTGCTGCTACTACTGCTGCTGCTAATACTCCGAGTTCTTCTTCGCATGATTTGATGAATTCTAATGTTAGTTTGCCGCCTTTTCCGGAGTTTTTCTCTTGCAGTGATTTTAATGATAATTTTAGTCATAGCTCTTCGTCTCAGTCGTTTAGTCGAAACGAAACTGTTGATGATTTCTTCCAAATTCCTTATATATTTTGA 549 0.4226 MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREETVNSLAYEADARLKDPVYGCIGAIAILQRKMVELQHDLAVAKDRLACCAAVAATTAAANTPSSSSHDLMNSNVSLPPFPEFFSCSDFNDNFSHSSSSQSFSRNETVDDFFQIPYIF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02182 182 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Vivi7g02182 182 Coils Coil 90 110 - -
Vivi7g02182 182 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 150 - -
Vivi7g02182 182 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02182 Vivi-Chr7 84533175 84533882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02182 1 117 AS2 family AT3G11090 78.632 3.51e-65 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi7g02182 LOB 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02182 - - gmx:100777635 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02182 7 84533175 84533882 Vivi7g02182 7 84533175 84533882 ECH