Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02160 ATGGCTAGCGTTGAAGATGTTTTTGAATTCCTTAGAAAAAATGGATTATCAGAAGCAGAGTCAGCTCTCAGAGAAGACATCATTGAAAAGACCAATCTCGCTTCCTTTGACTTCGAGAAATTCTTCTTTCCGATGATCCCTCCGCCTCCTCCGGTCAAACTCCGGTCAATTTCACGGTCATCGGAGTTTCCCGCCGATGATGGAAAATTCTCCAAATCGAACTCGGTTTCTTCCGATGAACAGTTTGTTAGCATCGGTTCACCTAGTTCTCGTGTTTCTTCTTCCGAGTTTATCAATCCATATGGAGTCAATTCCTCATCTCAGACACATAATGATTCTGAATCTTCATCTGATAGATTGTCACAATTTGGTACAGCGCGCGATTATCATGAGTTCGATATGCAACATGAACCGTATTGGTATAACGAAAATGATGATGATGATTTCATGACTCCTAGTTTTGATGGACCTGATTTCTTTGGATGTGAAACTGAAGATAAGTTTGTTACGGAAAATCAAGAAAATTCTCTCGATCTTCGTTACAAGTACAAAGAAATACAATTAGAGGGAAATGAGGGTTTCATGGGCAAGCCGATGAAGCAATGCATTTGTAATCATTCATCTATAGTTGATGAAAATCTGGATTACCGTCACGGGGATGAGAAAGATGCCGATGTGCGTAATTGTGAAGTTCCTATAAATTTTAGCTACTCTGACTTGAAGGAAATTGATCTGAATGATTTTCATTTGAAGGATATTATTGATTCTTTTGACTCTTCTCCGCTGCTTACCGTGAAGCAACATATCAATTCGTACACTAAAAATGATAGCAGTGAGAGGTATAAAGATTCATACGACTTAACCATCACAGTTGCTGAAACAGATCTATCGAATGGGATTGAACCTTATGAAGTAAGAGATGATCGAGAGTTGAGTGAAGATTTCCGAGAGCAAGACGTTGCCGCGGATGGAGAGGATAACAATACTGATGATGAGCTCTTAAAATACATTCAAGACGATGAATACGAAGTATTTGAGCTAAGAATCGTACATAGAAAAAATAGGACTGGATTTGAAGAAAATAAAGAAGTGCCGATTGTGCTAAATACAGTAATGGCTGGAAGATACTATGTGACAGAATATCTCGGTTCAGCTGCATTCAGTAGGGTTGTTCAAGCACACGATCTGCAGACGGGAGTCGATGTTTGTTTGAAGATTATCAAAAATGACAAAGATTTCTTTGATCAAAGCCTAGATGAAATCAAGCTTCTAAAACTTGTCAATAAGCACGACCCGGCAGATAAACACCACATATTGCGTCTTTATGATTATTTCTACCATCAGGAGCATTTATTCATCGTGACCGAACTTCTGCGAGCAAACTTATATGAATTTCAGAAATTCAACCAGGAATCTGGAGGTGAAGCATATTTCACCTTACATAGATTACAGCTCATTACTCGACAGTGTTTGGAGGCTTTACAGTATTTGCATAACTTGGGAATTGTTCATTGCGATTTGAAGCCCGAAAACGTTCTAGTAAAAAGTTACAAAAAGTGTGAAATCAAGATTATTGATCTTGGAAGCAGTTGCTTTAAAACAGACAATTTGTGCCTATATGTACAATCTCGATCTTATAGAGCTCCGGAAGTCATGTTAGGCCTTCAATATGACGAAAAGATTGATATCTGGTCGCTCGGCTGCATTTTGGCCGAGCTATGCTCCGGTGAAGTGCTCTTTCCAAATGATGCAGTCGTGATGATTCTCGCGCGCATGATTGGACTGTTTGGTCCTTTTGATATGGAGATGTTGGTGAAAGGGCAAGAAACACACAAGTACTTCACCAAAGAGTATGACATTTACTTTATGAATGAGGAGACAGATCAACTAGAATACTTAATCCCAGAAGAGACATCATTGGAGCAGCACCTACGGATCACGGATACCATGTTTCTCGACTTCGTCGGATACTTACTTAACACCAACCCGAAAAGAAGACCAACTGCAAGACAGGCACTAAAACATCCATGGCTTTCCTATGTTTACAAGTCCAAGTAA 2058 0.3946 MASVEDVFEFLRKNGLSEAESALREDIIEKTNLASFDFEKFFFPMIPPPPPVKLRSISRSSEFPADDGKFSKSNSVSSDEQFVSIGSPSSRVSSSEFINPYGVNSSSQTHNDSESSSDRLSQFGTARDYHEFDMQHEPYWYNENDDDDFMTPSFDGPDFFGCETEDKFVTENQENSLDLRYKYKEIQLEGNEGFMGKPMKQCICNHSSIVDENLDYRHGDEKDADVRNCEVPINFSYSDLKEIDLNDFHLKDIIDSFDSSPLLTVKQHINSYTKNDSSERYKDSYDLTITVAETDLSNGIEPYEVRDDRELSEDFREQDVAADGEDNNTDDELLKYIQDDEYEVFELRIVHRKNRTGFEENKEVPIVLNTVMAGRYYVTEYLGSAAFSRVVQAHDLQTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLHRLQLITRQCLEALQYLHNLGIVHCDLKPENVLVKSYKKCEIKIIDLGSSCFKTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGLFGPFDMEMLVKGQETHKYFTKEYDIYFMNEETDQLEYLIPEETSLEQHLRITDTMFLDFVGYLLNTNPKRRPTARQALKHPWLSYVYKSK 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02160 685 Gene3D Transferase(Phosphotransferase) domain 1 430 678 - -
Vivi7g02160 685 FunFam Serine/threonine-protein kinase ppk15 455 679 - -
Vivi7g02160 685 ProSiteProfiles Protein kinase domain profile. 376 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02160 685 SUPERFAMILY Protein kinase-like (PK-like) 365 681 IPR011009 -
Vivi7g02160 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Vivi7g02160 685 FunFam Putative serine/threonine-protein kinase dyrk2 370 457 - -
Vivi7g02160 685 Gene3D Phosphorylase Kinase; domain 1 371 457 - -
Vivi7g02160 685 MobiDBLite consensus disorder prediction 100 121 - -
Vivi7g02160 685 PANTHER DUAL SPECIFICITY PROTEIN KINASE 108 678 - -
Vivi7g02160 685 Pfam Protein kinase domain 378 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02160 685 SMART serkin_6 376 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02160 685 CDD PKc_DYRK_like 376 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02160 Vivi-Chr7 84110064 84113881 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02160 373 673 MAP Kinase Gene Family AT5G19010 31.153 9.11e-33 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Vivi7g02160 Pkinase 2.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02160 - - gmx:100795722 1003.82