Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02139 ATGAAGACCAATTCACTCTCCTCCGTCATCTTTTCATCTCTCACCCTCCTTTTCCTCCTTTCTTCGACACCCACTTCCAATGCTCTCGGCTCCGGCACCACCCTCGCCGTCGTCGACTCCACCGCCACCGTCTGCGGCATCGTCTCAGCCAACCAATCCCGCAACATTGTCTGCTACCGTCACGGCCGTCTCATCCCCGCCATACCTGACGTCTCCTTCTCCTCAATCTCCGGCGGGAAAAACTACTTCTGCGGCATTATTTCCGGGAACTACAGTATTCTCTGTTGGGACACTGTTTCATCAAACACGACTTTTCAAAGGAGAAGACTTTACTATAATGGTACTGTTCTATACGAGAATCTCTCTGTCGGTGATTCCCATGTTTGTGCTACCGTGGTTAACCTCGGAACGGTGTCGTGTTGGAGAATCAATAAAGGTTTTGTTTTGCCATCTGGGTTTGATCAATTTTCGTTGATAACTTCTGGGTTTGGATTCTCTTGTGGAATTTTGAAGGGAAATGATTCTGGGTCGGTTCGATGTTTTGGGAATGTGAATGGATCAATAGCTGAAAAGATAGAAAATGAGTTTATGAATGTTTCTATGGTGAGTCTTGTAGCTGGGGAGTCACATGTTTGTGGATTGGATTCAATAGGGTTTTTAGTTTGTAAAGGAAGTAACAATTTTGGTCAAATTAATGTTCCTGATCAAGATAAGCCTTTGGAGTATTCTGATTTAGCGTTAGGAGCTGAACATAGTTGCGCTATTAGAAGATCTAATGGTTCTGTTGTTTGTTGGGGTGGTAGAGGATTGTTTTCTGTTAATGCGACAGAAAGTGTTTCTTTTGAGGTTATTGTTTCGGGTTCGAATTTTACCTGTGGACTAACAACAAACAATTTTTCGGTTATTTGTTGGGGTCCTGGTTGGTTTAATAACGATTCGGGTTCGGTTCTTAAGCTTCCTTTGCCTCCTATTCTTCCAGGTGTTTGTGTTCAATCTTCTTGTAGTGAATGTGGTATATATCCTCATTCTCAGTATTTGTGTTCTAGTTTTGGTAACATTTGTAAGGCGAAACCTTGTTGGCCTCAAATGCAGGTTCTGGCGCCGCCAGAGGGAGAACCACCGTGGCAGCCGGGGTTGCCTGTTTCGAGTTCAAAAGCGTTGACAAAAGGTTTATTGGCATTTGTTATTGTTGGATCAATTGGAACATTTGCTGGTTTTTGCACTGTGGTTTATTGTTTGTGGACTGGTGTTTGTTTTGGTAAGAAGAAAGTTCACAGTTCAGTTCAACCGACCATAACTAGGGCTGGAAGTTTCAATTGTGGCGCATTTTCGAATTACAGTCCGCCTTCGAGAGCGTCCACTATTAGGCGACAGAGTTCGAGGATAATGAGGCGTCAGAGAAGCGGAACTTCATCGACAAGACAACCAGATAAGTCAGAGGAGTTCACTCTTGCTGACCTTGTTACAGCCACCAACAATTTCTCACCTGAGAACAAGATTGGTGCTGGAAGCTACGGTGTTGTTTACAAAGGTAAACTCGCCGATGGCCGGGAGGTAGCAATCAAAAGAGGCGAAACTGGTACAATAACAAAGGTTTTTCAAGAGAAAGAGAGCGCGTTTGAGTCTGAATTAGTCTTTTTGTCACGTCTGCATCACAAGCATTTAGTTAGGCTAGTCGGTTTCTGTGACGAGAAAGATGAAAGGCTCTTGGTGTATGAGTTCATGAAGAATGGAGCATTGTATGATCATTTGCACGACAAGAATAACGTCGACAAGAATAGTAGTTTACTGAATACTTGGAAAATGAGGATCAAAATCGCATTGGATGCTTCTCGAGGAATTGAGTATCTCCATAATTATGCAGTTCCATCAATAATTCACAGAGACATAAAGTCATCAAACATTCTCATTGATGCGAATTGGACAGCGCGAGTATCTGATTTCGGATTATCATTAATGAGTCCTGATTCAGATCACGACTACATACCAACGAAAGCAGCAGGAACGGTCGGATACATTGATCCCGAATATTACGGTCTAAATGTATTAACATCAAAGAGTGATGTATACGGTCTCGGAGTAGTTTTACTAGAACTATTAACAGGAAAAAGAGCTATATTCAAGAACGACGAAAACGGAGGAACACCGGTGAGTATAGTTGATTTTGCAGTGCCTATAATCATGGAAGGAGAAATAGCGAAAATTTTGGATCAAAGAGTCGAACCACCAGAGATGAATGAAAAAGAAGCAGTGGAATTGGTAGCATATACTGCAATGCATTGTGTGCATTTGGAAGGAAAAGGTAGACCAACAATGGCGGATATTGTAGCGAATTTGGAACGGGCTTTCACTCTTTGTGATAGTAGTAGTCATGGCAGCATTTCAAGTGATACAATCTCTGTTGGATCTGACTGA 2415 0.4253 MKTNSLSSVIFSSLTLLFLLSSTPTSNALGSGTTLAVVDSTATVCGIVSANQSRNIVCYRHGRLIPAIPDVSFSSISGGKNYFCGIISGNYSILCWDTVSSNTTFQRRRLYYNGTVLYENLSVGDSHVCATVVNLGTVSCWRINKGFVLPSGFDQFSLITSGFGFSCGILKGNDSGSVRCFGNVNGSIAEKIENEFMNVSMVSLVAGESHVCGLDSIGFLVCKGSNNFGQINVPDQDKPLEYSDLALGAEHSCAIRRSNGSVVCWGGRGLFSVNATESVSFEVIVSGSNFTCGLTTNNFSVICWGPGWFNNDSGSVLKLPLPPILPGVCVQSSCSECGIYPHSQYLCSSFGNICKAKPCWPQMQVLAPPEGEPPWQPGLPVSSSKALTKGLLAFVIVGSIGTFAGFCTVVYCLWTGVCFGKKKVHSSVQPTITRAGSFNCGAFSNYSPPSRASTIRRQSSRIMRRQRSGTSSTRQPDKSEEFTLADLVTATNNFSPENKIGAGSYGVVYKGKLADGREVAIKRGETGTITKVFQEKESAFESELVFLSRLHHKHLVRLVGFCDEKDERLLVYEFMKNGALYDHLHDKNNVDKNSSLLNTWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDANWTARVSDFGLSLMSPDSDHDYIPTKAAGTVGYIDPEYYGLNVLTSKSDVYGLGVVLLELLTGKRAIFKNDENGGTPVSIVDFAVPIIMEGEIAKILDQRVEPPEMNEKEAVELVAYTAMHCVHLEGKGRPTMADIVANLERAFTLCDSSSHGSISSDTISVGSD 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02139 804 MobiDBLite consensus disorder prediction 447 478 - -
Vivi7g02139 804 Gene3D - 187 340 IPR009091 -
Vivi7g02139 804 Gene3D Phosphorylase Kinase; domain 1 453 574 - -
Vivi7g02139 804 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 198 790 IPR044815 GO:0004674
Vivi7g02139 804 SUPERFAMILY Protein kinase-like (PK-like) 471 779 IPR011009 -
Vivi7g02139 804 FunFam Serine/threonine-protein kinase-like protein CCR4 575 797 - -
Vivi7g02139 804 SMART serkin_6 494 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02139 804 Pfam Protein kinase domain 496 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02139 804 ProSiteProfiles Protein kinase domain profile. 494 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02139 804 MobiDBLite consensus disorder prediction 464 478 - -
Vivi7g02139 804 FunFam receptor-like protein kinase FERONIA 456 574 - -
Vivi7g02139 804 Gene3D Transferase(Phosphotransferase) domain 1 575 793 - -
Vivi7g02139 804 SUPERFAMILY RCC1/BLIP-II 17 267 IPR009091 -
Vivi7g02139 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Vivi7g02139 804 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02139 Vivi-Chr7 83581644 83584460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02139 8 804 Receptor kinase-like Gene Family AT3G55950 57.265 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Vivi7g02139 Pkinase 6.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02139 - - gmx:100782916 1169.45