Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02132 ATGGTTCAACAGCAGCTCCTCCACCGTGTTGATCCTAAAATATGGCAACAATGTGCCGGCGACTCCGTCACTGTTCTGAAGCTGAACTCCAAACTCTATTATTTTCCTCGAGGTCATTTGGAACATGCTTGCCCTAACTACCCTTCCACTCAAGCACTCTCCCTCATTGATGCCTGCCGTCCATCCATTCTCTGCGTGGTCTCTTCTGTTGATCTCTTTGCAGATTCTAAAACTGATGAACTTGTTGCAAAGCTACTTCTCACTCCTGTAATTGACGGTGGTGTTCTACCTTCCCAGGCTGGCGACATAGATGAAGATGATGATCAGATTGTTTCCTATGCAAAGACTCTAACTCAATCTGATGCCAATAATGGTGGTGCATTTTCCATACCTGTCAAATGCGCTAAATTTATCTTCCCACCACTTGACTACAACACCGAATCTCCATCTCAAATTGTGTCAGTCACAGACTTTCACGGCAAGGTCTGGAATTTTCGCCATGTGTACTCCGGGACACCCAAGCGGCACTTAATCACCAATGGCTGGAGTACTTTTTCTAACGATAAGAAACTAGTCGGCGGTGATACTGTTGTTTTTGTTAAAAACTTAACCGGAAATATCACCATTGGACTTCGCCGGAGAAACAGGTCTGCGGCGGCTGCTAACATATCCGAAAAGGCAGTTATCAAGGCTGTAGAATTGGCAGAGAAGAATGCTGCGTTTGAGGTAATGTACTATCCGACGGTCGGTGGTTTTGATTTTGTGGTGGGAACTAAGGCTGTGGAGGATGCAAGGAAAATCAGTTGGAATCCTGGAATGAGTGTTAAATACACTGCAAAAACCAATGGTGATAATTCAAAAGGGTGTTCAATTTTTCATGGGACAATATCTTCTATCGCTCCTCCTTGTATTAGTCCATGGCGCATGCTTCAGGTTAATTGGAATGAATCTACGGTTTTTGGAAATCTAGGGAAAGTAAGTCCATGGCAGGTTGAAATTATTTCCAACAAACCTATTGTGCATCTACGGTCTCCTCCAACAAAAAAGCTTAGAGTTTCTCTATCGGATGATTCTAGTAGTGATAGCAACAACAAAGAGGTTACTTATTCATCAATTATGTTATTTGGTAAGAGGATAATAGGTGTTAGAAATACATGA 1158 0.4275 MVQQQLLHRVDPKIWQQCAGDSVTVLKLNSKLYYFPRGHLEHACPNYPSTQALSLIDACRPSILCVVSSVDLFADSKTDELVAKLLLTPVIDGGVLPSQAGDIDEDDDQIVSYAKTLTQSDANNGGAFSIPVKCAKFIFPPLDYNTESPSQIVSVTDFHGKVWNFRHVYSGTPKRHLITNGWSTFSNDKKLVGGDTVVFVKNLTGNITIGLRRRNRSAAAANISEKAVIKAVELAEKNAAFEVMYYPTVGGFDFVVGTKAVEDARKISWNPGMSVKYTAKTNGDNSKGCSIFHGTISSIAPPCISPWRMLQVNWNESTVFGNLGKVSPWQVEIISNKPIVHLRSPPTKKLRVSLSDDSSSDSNNKEVTYSSIMLFGKRIIGVRNT 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02132 385 ProSiteProfiles B3 DNA-binding domain profile. 113 215 IPR003340 GO:0003677
Vivi7g02132 385 Gene3D - 110 214 IPR015300 -
Vivi7g02132 385 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 10 356 IPR044835 GO:0003677|GO:0006355|GO:0009725
Vivi7g02132 385 Pfam B3 DNA binding domain 114 215 IPR003340 GO:0003677
Vivi7g02132 385 Gene3D - 269 338 - -
Vivi7g02132 385 SUPERFAMILY DNA-binding pseudobarrel domain 108 215 IPR015300 -
Vivi7g02132 385 CDD B3_DNA 112 199 IPR003340 GO:0003677
Vivi7g02132 385 SMART B3_2 113 215 IPR003340 GO:0003677
Vivi7g02132 385 Pfam Auxin response factor 231 311 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02132 Vivi-Chr7 83524588 83525745 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02132 8 369 B3 DNA Binding Superfamily AT1G77850 36.253 8.35e-90 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Vivi7g02132 B3 2.9e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02132 - - psat:127121125 542.347