Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02120 ATGTTTGATATCAATGGGTTACACACTGTCCCTATCTATTGGGTGAGCATGTTAACCATATCATGGTTACTCTCATCCATTTGTTATCTCAAAGTCCAAAGAAAACTTGTTGGTAGCGTTGGCATCACTTTAAGGGTATATCCTATCCCTCCTTATGGCAACGCTACTGGACTTAGATTACTTATGGAAGATCCAGACAACAAGTATGGGTTAATAAGCGAAGGTATGGCTGTCACACTATCTGCGTACGTAGACGCACTAGTGTGGAGACCTTTCATCATTGATGTAGGCATACCCGGGGCAGCAAAGAGCTTCGTGGCAGAATGCAATGCTTTAGGAAAGATGAAACACCGGAATCTTGTGAAGATCCTAACTTGCTGTTCAAGTGTTGATTACAAGGGTGAAGATTTCAAGGCTATTGTTTTTGAGTTCATGCCTAATGGGAGTCTTGAAAATGTGTTGCATAATCATGAAGGGTCTGAAAATCATAGTCTCAGCATAATACAGATGGTAGATATTGCTCTGGATATAGCTCATGCATTGGATTATCTTCACCATGATGAAGACGAAGTTGTAGTTCATTGTGACGTTAAGCCAAGCAACGTTCTTCTGGATGAAGATATTGTTGCCCATTTGGGAGACTTTGGTTTAGCTAGGCTAATTCGTGGAGCCACCGAACATTCAAGTAAAGATCAAGTTAACTCCTCAACAATTAAAGGAACTATAGGATATCTTCCTCATGAGTACGGAGCAGGTGGTCCAATATCATCACTGGGAGATATCTACAGCTATGGAATTCTTCTGTTAGAAATGCTCACCGGAAAGAGACCAACAGATAACATGTTTTCTGATAATGTAAACCTGCACCAATTTTGCAAGGTGAAAATTCCAGAAGAAATTCTTGAAATAGTGGATCAACGTTTGCTTGAGCCATTTGCAGAAGATCAGACAGGAACCGTGGAAAACAAGATTAGGAAGTGTTTGGTGATGTTTGCTAAAGTCGGAGTTGCTTGTTCTGAAGAATTTCCTAATCAGCGAATGTTGATAAAAGATGTTATATTTAGGTTGAATGAAATCAAATCAATGTTTCCATGA 1095 0.3973 MFDINGLHTVPIYWVSMLTISWLLSSICYLKVQRKLVGSVGITLRVYPIPPYGNATGLRLLMEDPDNKYGLISEGMAVTLSAYVDALVWRPFIIDVGIPGAAKSFVAECNALGKMKHRNLVKILTCCSSVDYKGEDFKAIVFEFMPNGSLENVLHNHEGSENHSLSIIQMVDIALDIAHALDYLHHDEDEVVVHCDVKPSNVLLDEDIVAHLGDFGLARLIRGATEHSSKDQVNSSTIKGTIGYLPHEYGAGGPISSLGDIYSYGILLLEMLTGKRPTDNMFSDNVNLHQFCKVKIPEEILEIVDQRLLEPFAEDQTGTVENKIRKCLVMFAKVGVACSEEFPNQRMLIKDVIFRLNEIKSMFP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02120 364 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 100 361 - -
Vivi7g02120 364 SMART serkin_6 30 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02120 364 SUPERFAMILY Protein kinase-like (PK-like) 100 356 IPR011009 -
Vivi7g02120 364 ProSiteProfiles Protein kinase domain profile. 29 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02120 364 Pfam Protein kinase domain 103 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02120 364 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 145 364 - -
Vivi7g02120 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Vivi7g02120 364 Gene3D Transferase(Phosphotransferase) domain 1 149 363 - -
Vivi7g02120 364 Gene3D Phosphorylase Kinase; domain 1 95 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02120 Vivi-Chr7 83415423 83417659 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02120 93 363 Receptor kinase-like Gene Family AT3G47570 46.909 1.35e-77 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi7g02120 Pkinase 5.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02120 - - vvo:131619518 729.554