Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02119 ATGAGGATTTGTACGATGTTTCTTCTCTGCTTTGCTACCCAAGTGATGGTTTATTACATGAACTCAACAACAACAACATATGCACTCTCCTTAAGCTCACAGACGGATAAGCTTGCTTTGCTAGCTTTGAAGGAAAAAATTACAAATGGTGTGCCTGATTCTCTACCATCATGGAATCACTCTTTGCATTTCTGTGATTGGGAGGGTGTCACATGTGGGCGCCGTCACATGAGAGTATCTGTCTTGCATTTGGAGAATCAAACTTGGGGTGGTACTCTTGGTCCATCCTTAGGAAATCTCACATTTCTCAGAATACTCAAACTTCAAAACCTCGCTTTGCATGGTGAAATTCCAGCTTTGATTGGTCGTTTGAAGCGATTGCAACTTCTTAGCTTAGGAAATAACAAACTTCAAGGAGAGATTCCTAAAGAGCTTACTAACTGCACAAATATCAAAGTATTGGAGTTGCTGGAAAATCGGTTCACAGGAAGAGTTCCCACGTGGTTTGGATCAATGAAGCAACTTACTACCTTGATTTTTGAGAACAACAATCTAGTTGGTACAATTCCATCTTCCCTACAAAATGTTTCATCACTCCAATATCTATCTCTTTTAGAAAATCATTTGGAAGGAACCATACCTTATTCTTTAGGAAACTTTTCCACCCATCTTGCTTGGCTAAGGATGGAGTTTAATCAAATATCTGGAGTGATACCTAAGAGAATTGGACAACTTACCGGGTTAACTTACTTAAGCCTTGGAAATAATTTGTTTGAGGGAATAATTCCAGATTCAATTGGAAATCTTACAAATCTAATAAGATTGGACTTGCAAGATAACAAATTATCTGGCAATATTCCTACGAGTATTGGCAATCTTACTGTCTTGTCTGAGTTATATCTAGCTCAAAACAAATTAGAAGGACAAATTCCATTAACCCTTAGATATTGCACCCAATTGCAGATATTAAATATCTGTGATAACAAACTGAGTGGGGATATACCCAATCAGATATTTGGCTATCTAAAGAATTTAATATTCTTATACTTATGCTCCAACTCATTGACTGGTCCCATTCCTTTAGAGTTTGGTAACTTGGATCATCTTTCACTATTGGATCTACACTCAAATAAGTTCACCGGTGAAATTCCCAAGGATCTCACTTCTTGTATGTCATTAACAAATCTCTTTCTAGGGGGAAACTTTTTCCATGGAGAAATACCTTCGTTCTTGGGATCTTTAAAGTCCTTAGAATTCATTGACATTTCTCACAACAAATTCTCAAGCACAATCCCTTTTGAACTAGAAAATCTGAAATTTTTGATTATGTTGAACTTGTCTTTCAACAATCTTTATGGTGAAGTTCCCAAAAGAGGTGTCTTTAGCAATGTATCAGCAATTTCATTAATTGGAAATAAGAACCTTTGTGGTGGGATATCTCAATTGAAGCTTCCACCATGTTTGAAAGTACCTTCCAAGAAACACAAAAGATCTATAAAAGAGAAACTTATCATCATCAGTGTAATTGGTGGGATTTTGATCTCTTTCATAGCTTTTATAACTGTCCATTTTCTCACGAGAAAGTCCAAAAAGTTACCTTCTTCACCATCTCTTCAAAATAGGGCACTAAGAGTTACTTACGGAGAGTTACACGAAGCAACCAATGGATTTTCTTCAGCCAATTTGGTAGGGACAGGAAGTTTTGGATCTGTTTACAAAGGATCTCTTCTCAACTTTGGAAGACCTATTGCTGTAAAGGTGTTGAATCTTGAAACACGCGGGGCAGCAAAGAGTTTCGTGGCAGAATGCAATGCTCTAGGAAAGATGAAACACCGGAATCTTGTGAAGATCCTAACTTGTTGTTCAAGTGTTGATTACAACGGTGAAGATTTCAAGGCTATTGTTTTTGAGTTCATGTCTAATGGGAGTCTAGAAAAGTTGTTGCATGATAATGAAGGGTCCGAAAATCATAATCTCAGCCTCACACAAAGGGTAGACATTGCTCTTGATGTAGCTCATGCATTGGATTATCTTCACCATGATGAAGACCAAGTCGTAGTTCATTGTGATATTAAGCCAAGCAATGTTCTTCTTGATGAAGATATTGTTGGCCATTTGGGAGACTTTGGTTTAGCTAGGCTCATTCATGGAGCCGCCGAACATTCAAGTAAAGATCAAGTTAGTTCCTCAACAGTTAAAGGAACTATAGGATATCTTCCTCCTGAGTACGGAGCAGGTGGTCCAATATCATCGCAGGGAGATATCTACAGTTATGGAATTCTTGTATTAGAAATGCTCACTGGAAAGAGACCCACAAATAACATGTTTTGTGAGAATATAAGCCTACACCAATTCTGTAAGGTGAAGATTCCAGAAGGAATTCTTGAGATAGTGGATCAACGTTTGCTTGAGCCATTTGCTGAAGATCAGACAGGGATTGTGGAAAACAAGGTTAGGAAGTGTTTGGTGATGTTTGCTCAAATAGGAGTTGCTTGTTCTGAAGAATTTCCTAACCAGCGAATGTTGATAAAAGATGTTATAGTTAGGTTGAATGAAATCAAATCAAGGTTGCCATGA 2577 0.3772 MRICTMFLLCFATQVMVYYMNSTTTTYALSLSSQTDKLALLALKEKITNGVPDSLPSWNHSLHFCDWEGVTCGRRHMRVSVLHLENQTWGGTLGPSLGNLTFLRILKLQNLALHGEIPALIGRLKRLQLLSLGNNKLQGEIPKELTNCTNIKVLELLENRFTGRVPTWFGSMKQLTTLIFENNNLVGTIPSSLQNVSSLQYLSLLENHLEGTIPYSLGNFSTHLAWLRMEFNQISGVIPKRIGQLTGLTYLSLGNNLFEGIIPDSIGNLTNLIRLDLQDNKLSGNIPTSIGNLTVLSELYLAQNKLEGQIPLTLRYCTQLQILNICDNKLSGDIPNQIFGYLKNLIFLYLCSNSLTGPIPLEFGNLDHLSLLDLHSNKFTGEIPKDLTSCMSLTNLFLGGNFFHGEIPSFLGSLKSLEFIDISHNKFSSTIPFELENLKFLIMLNLSFNNLYGEVPKRGVFSNVSAISLIGNKNLCGGISQLKLPPCLKVPSKKHKRSIKEKLIIISVIGGILISFIAFITVHFLTRKSKKLPSSPSLQNRALRVTYGELHEATNGFSSANLVGTGSFGSVYKGSLLNFGRPIAVKVLNLETRGAAKSFVAECNALGKMKHRNLVKILTCCSSVDYNGEDFKAIVFEFMSNGSLEKLLHDNEGSENHNLSLTQRVDIALDVAHALDYLHHDEDQVVVHCDIKPSNVLLDEDIVGHLGDFGLARLIHGAAEHSSKDQVSSSTVKGTIGYLPPEYGAGGPISSQGDIYSYGILVLEMLTGKRPTNNMFCENISLHQFCKVKIPEGILEIVDQRLLEPFAEDQTGIVENKVRKCLVMFAQIGVACSEEFPNQRMLIKDVIVRLNEIKSRLP 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02119 858 Pfam Leucine rich repeat 319 379 IPR001611 GO:0005515
Vivi7g02119 858 Pfam Leucine rich repeat 247 306 IPR001611 GO:0005515
Vivi7g02119 858 SUPERFAMILY RNI-like 106 458 - -
Vivi7g02119 858 Pfam Protein kinase domain 560 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02119 858 Gene3D Ribonuclease Inhibitor 197 488 IPR032675 -
Vivi7g02119 858 FunFam Leucine-rich repeat receptor-like protein kinase 33 190 - -
Vivi7g02119 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 686 698 IPR008271 GO:0004672|GO:0006468
Vivi7g02119 858 SMART LRR_sd22_2 245 266 - -
Vivi7g02119 858 SMART LRR_sd22_2 414 435 - -
Vivi7g02119 858 SMART LRR_sd22_2 124 147 - -
Vivi7g02119 858 SMART LRR_sd22_2 172 198 - -
Vivi7g02119 858 SMART LRR_sd22_2 269 295 - -
Vivi7g02119 858 FunFam LRR receptor-like serine/threonine-protein kinase EFR 528 638 - -
Vivi7g02119 858 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 639 858 - -
Vivi7g02119 858 ProSiteProfiles Protein kinase domain profile. 557 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02119 858 Gene3D Transferase(Phosphotransferase) domain 1 639 857 - -
Vivi7g02119 858 SUPERFAMILY Protein kinase-like (PK-like) 532 852 IPR011009 -
Vivi7g02119 858 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Vivi7g02119 858 FunFam LRR receptor-like serine/threonine-protein kinase EFR 191 493 - -
Vivi7g02119 858 SMART serkin_6 557 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02119 858 SMART LRR_typ_2 269 293 IPR003591 -
Vivi7g02119 858 SMART LRR_typ_2 366 390 IPR003591 -
Vivi7g02119 858 SMART LRR_typ_2 245 268 IPR003591 -
Vivi7g02119 858 SMART LRR_typ_2 124 148 IPR003591 -
Vivi7g02119 858 SMART LRR_typ_2 172 195 IPR003591 -
Vivi7g02119 858 SMART LRR_typ_2 414 435 IPR003591 -
Vivi7g02119 858 SMART LRR_typ_2 438 463 IPR003591 -
Vivi7g02119 858 Gene3D Phosphorylase Kinase; domain 1 520 638 - -
Vivi7g02119 858 Gene3D Ribonuclease Inhibitor 33 192 IPR032675 -
Vivi7g02119 858 ProSitePatterns Protein kinases ATP-binding region signature. 563 586 IPR017441 GO:0005524
Vivi7g02119 858 PANTHER OS04G0122200 PROTEIN 107 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02119 Vivi-Chr7 83409095 83412513 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02119 82 857 Receptor kinase-like Gene Family AT3G47570 41.211 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi7g02119 Pkinase 1.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02119 - - mtr:25482466 980.704