Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02118 ATGAGGATTTGTACGATGTTTCTTCTCTGCTTTGCTACCCAAGTGATGGTTTATTACATGAACTCAACAACAACAACATATGCACTCTCCTTAAGCTCACAGACGGATAAGCTTGCTTTGCTAGCTTTGAAGGAAAAAATTACAAATGGTGTGCCTGATTCTCTACCATCATGGAATCACTCTTTGCATTTCTGTGATTGGGAGGGTGTCACATGTGGGCGCCGTCACATGAGAGTATCTGTCTTGCATTTGGAGAATCAAACTTGGGGTGGTACTCTTGGTCCATCCTTAGGAAATCTCACATTTCTCAGAATACTCAAACTTCAAAACCTCGCTTTGCATGGTGAAATTCCAGCTTTGATTGGTCGTTTGAAGCGATTGCAACTTCTTAGCTTAGGAAATAACAAACTTCAAGGAGAGATTCCTAAAGAGCTTACTAACTGCACAAATATCAAAGTATTGGAGTTGCTGGAAAATCGGTTCACAGGAAGAGTTCCCACGTGGTTTGGATCAATGAAGCAACTTACTACCTTGATTTTTGAGAACAACAATCTAGTTGGTACAATTCCATCTTCCCTACAAAATGTTTCATCACTCCAATATCTATCTCTTTTAGAAAATCATTTGGAAGGAACCATACCTTATTCTTTAGGTAAGTTGTCAAGTTTGAAATATCTGTCTTTAGCTTTAAATAGTAATTTGTCAGGTGAAATCCCTCCTTCCCTTTACAACCTATCAAATATTCAATGTTTTGATCTTGGAGTAAATGAGTTATATGGTAGTTTTCCATCAAATTTAGGTCATATTTTTCCCTATCTTGTAGAGTTCTATGTAGGAGACAACTATATAACCGGGAATTTTCCCACTTCAATATCAAACCTCACTGATTTGCAAATATTTGATATAGGGGGGAATTCTTTTAATGGGTCAGTACCTCTTACTTTGGGTCGATTAAATAAACTTGAATATTTAAATATCGAGAGTAATAATTTTGGAAGTGGAAGGACTAAAGATTTGGACTTTCTTTCTTCATTATCCAACTGTACTGAACTGTCAACATTCTCTTTTCATAGTAATAATTTTGGTGGTGAATTGCCGAGTCTTATAGGAAACTTTTCCACCCATCTTGCTTGGCTAAGGATGGAGTTTAATCAAATATCTGGAGTGATACCTAAGAGAATTGGACAACTTACCGGGTTAACTTACTTAAGCCTTGGAAATAATTTGTTTGAGGGAATAATTCCAGATTCAATTGGAAATCTTACAAATCTAATAAGATTGGACTTGCAAGATAACAAATTATCTGGCAATATTCCTACGAGTATTGGCAATCTTACTGTCTTGTCTGAGTTATATCTAGCTCAAAACAAATTAGAAGGACAAATTCCATTAACCCTTAGATATTGCACCCAATTGCAGATATTAAATATCTGTGATAACAAACTGAGTGGGGATATACCCAATCAGATATTTGGCTATCTAAAGAATTTAATATTCTTATACTTATGCTCCAACTCATTGACTGGTCCCATTCCTTTAGAGTTTGGTAACTTGGATCATCTTTCACTATTGGATCTACACTCAAATAAGTTCACCGGTGAAATTCCCAAGGATCTCACTTCTTGTATGTCATTAACAAATCTCTTTCTAGGGGGAAACTTTTTCCATGGAGAAATACCTTCGTTCTTGGGATCTTTAAAGTCCTTAGAATTCATTGACATTTCTCACAACAAATTCTCAAGCACAATCCCTTTTGAACTAGAAAATCTGAAATTTTTGATTATGTTGAACTTGTCTTTCAACAATCTTTATGGTGAAGTTCCCAAAAGAGGTGTCTTTAGCAATGTATCAGCAATTTCATTAATTGGAAATAAGAACCTTTGTGGTGGGATATCTCAATTGAAGCTTCCACCATGTTTGAAAGTACCTTCCAAGAAACACAAAAGATCTATAAAAGAGAAACTTATCATCATCAGTGTAATTGGTGGGATTTTGATCTCTTTCATAGCTTTTATAACTGTCCATTTTCTCACGAGAAAGTCCAAAAAGTTACCTTCTTCACCATCTCTTCAAAATAGGGCACTAAGAGTTACTTACGGAGAGTTACACGAAGCAACCAATGGATTTTCTTCAGCCAATTTGGTAGGGACAGGAAGTTTTGGATCTGTTTACAAAGGATCTCTTCTCAACTTTGGAAGACCTATTGCTGTAAAGGTGTTGAATCTTGAAACACGCGGGGCAGCAAAGAGTTTCGTGGCAGAATGCAATGCTCTAGGAAAGATGAAACACCGGAATCTTGTGAAGATCCTAACTTGTTGTTCAAGTGTTGATTACAACGGTGAAGATTTCAAGGCTATTGTTTTTGAGTTCATGTCTAATGGGAGTCTAGAAAAGTTGTTGCATGATAATGAAGGGTCCGAAAATCATAATCTCAGCCTCACACAAAGGGTAGACATTGCTCTTGATGTAGCTCATGCATTGGATTATCTTCACCATGATGAAGACCAAGTCGTAGTTCATTGTGATATTAAGCCAAGCAATGTTCTTCTTGATGAAGATATTGTTGGCCATTTGGGAGACTTTGGTTTAGCTAGGCTCATTCATGGAGCCGCCGAACATTCAAGTAAAGATCAAGTTAGTTCCTCAACAGTTAAAGGAACTATAGGATATCTTCCTCCTGAGTACGGAGCAGGTGGTCCAATATCATCGCAGGGAGATATCTACAGTTATGGAATTCTTGTATTAGAAATGCTCACTGGAAAGAGACCCACAAATAACATGTTTTGTGAGAATATAAGCCTACACCAATTCTGTAAGGTGAAGATTCCAGAAGGAATTCTTGAGATAGTGGATCAACGTTTGCTTGAGCCATTTGCTGAAGATCAGACAGGGATTGTGGAAAACAAGGTTAGGAAGTGTTTGGTGATGTTTGCTCAAATAGGAGTTGCTTGTTCTGAAGAATTTCCTAACCAGCGAATGTTGATAAAAGATGTTATAGTTAGGTTGAATGAAATCAAATCAAGGTTGCCATGA 3033 0.3693 MRICTMFLLCFATQVMVYYMNSTTTTYALSLSSQTDKLALLALKEKITNGVPDSLPSWNHSLHFCDWEGVTCGRRHMRVSVLHLENQTWGGTLGPSLGNLTFLRILKLQNLALHGEIPALIGRLKRLQLLSLGNNKLQGEIPKELTNCTNIKVLELLENRFTGRVPTWFGSMKQLTTLIFENNNLVGTIPSSLQNVSSLQYLSLLENHLEGTIPYSLGKLSSLKYLSLALNSNLSGEIPPSLYNLSNIQCFDLGVNELYGSFPSNLGHIFPYLVEFYVGDNYITGNFPTSISNLTDLQIFDIGGNSFNGSVPLTLGRLNKLEYLNIESNNFGSGRTKDLDFLSSLSNCTELSTFSFHSNNFGGELPSLIGNFSTHLAWLRMEFNQISGVIPKRIGQLTGLTYLSLGNNLFEGIIPDSIGNLTNLIRLDLQDNKLSGNIPTSIGNLTVLSELYLAQNKLEGQIPLTLRYCTQLQILNICDNKLSGDIPNQIFGYLKNLIFLYLCSNSLTGPIPLEFGNLDHLSLLDLHSNKFTGEIPKDLTSCMSLTNLFLGGNFFHGEIPSFLGSLKSLEFIDISHNKFSSTIPFELENLKFLIMLNLSFNNLYGEVPKRGVFSNVSAISLIGNKNLCGGISQLKLPPCLKVPSKKHKRSIKEKLIIISVIGGILISFIAFITVHFLTRKSKKLPSSPSLQNRALRVTYGELHEATNGFSSANLVGTGSFGSVYKGSLLNFGRPIAVKVLNLETRGAAKSFVAECNALGKMKHRNLVKILTCCSSVDYNGEDFKAIVFEFMSNGSLEKLLHDNEGSENHNLSLTQRVDIALDVAHALDYLHHDEDQVVVHCDIKPSNVLLDEDIVGHLGDFGLARLIHGAAEHSSKDQVSSSTVKGTIGYLPPEYGAGGPISSQGDIYSYGILVLEMLTGKRPTNNMFCENISLHQFCKVKIPEGILEIVDQRLLEPFAEDQTGIVENKVRKCLVMFAQIGVACSEEFPNQRMLIKDVIVRLNEIKSRLP 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02118 1010 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 74 340 - -
Vivi7g02118 1010 Gene3D Transferase(Phosphotransferase) domain 1 791 1009 - -
Vivi7g02118 1010 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 344 1003 - -
Vivi7g02118 1010 Gene3D Ribonuclease Inhibitor 336 640 IPR032675 -
Vivi7g02118 1010 Gene3D Phosphorylase Kinase; domain 1 672 790 - -
Vivi7g02118 1010 ProSitePatterns Protein kinases ATP-binding region signature. 715 738 IPR017441 GO:0005524
Vivi7g02118 1010 FunFam LRR receptor-like serine/threonine-protein kinase EFR 680 790 - -
Vivi7g02118 1010 SMART LRR_typ_2 566 587 IPR003591 -
Vivi7g02118 1010 SMART LRR_typ_2 590 615 IPR003591 -
Vivi7g02118 1010 SMART LRR_typ_2 124 148 IPR003591 -
Vivi7g02118 1010 SMART LRR_typ_2 172 195 IPR003591 -
Vivi7g02118 1010 SMART LRR_typ_2 421 445 IPR003591 -
Vivi7g02118 1010 SMART LRR_typ_2 518 542 IPR003591 -
Vivi7g02118 1010 SMART LRR_typ_2 397 420 IPR003591 -
Vivi7g02118 1010 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 791 1010 - -
Vivi7g02118 1010 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Vivi7g02118 1010 SUPERFAMILY L domain-like 59 372 - -
Vivi7g02118 1010 Pfam Leucine rich repeat 471 531 IPR001611 GO:0005515
Vivi7g02118 1010 Pfam Leucine rich repeat 399 458 IPR001611 GO:0005515
Vivi7g02118 1010 SUPERFAMILY Protein kinase-like (PK-like) 684 1004 IPR011009 -
Vivi7g02118 1010 SUPERFAMILY L domain-like 374 629 - -
Vivi7g02118 1010 FunFam LRR receptor-like serine/threonine-protein kinase EFR 341 645 - -
Vivi7g02118 1010 ProSiteProfiles Protein kinase domain profile. 709 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02118 1010 Gene3D Ribonuclease Inhibitor 94 215 IPR032675 -
Vivi7g02118 1010 Gene3D Ribonuclease Inhibitor 29 93 IPR032675 -
Vivi7g02118 1010 CDD STKc_IRAK 715 1005 - -
Vivi7g02118 1010 SMART LRR_sd22_2 421 447 - -
Vivi7g02118 1010 SMART LRR_sd22_2 270 296 - -
Vivi7g02118 1010 SMART LRR_sd22_2 397 418 - -
Vivi7g02118 1010 SMART LRR_sd22_2 124 147 - -
Vivi7g02118 1010 SMART LRR_sd22_2 172 198 - -
Vivi7g02118 1010 SMART LRR_sd22_2 566 587 - -
Vivi7g02118 1010 Gene3D Ribonuclease Inhibitor 216 335 IPR032675 -
Vivi7g02118 1010 SMART serkin_6 709 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02118 1010 Pfam Protein kinase domain 712 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02118 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 838 850 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02118 Vivi-Chr7 83409094 83412513 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02118 32 1008 Receptor kinase-like Gene Family AT3G47570 43.883 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi7g02118 Pkinase 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02118 - - mtr:25482466 1293.87