Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02116 ATGAGAATTTTAATGTCTTGTTTCCTCTTCTTTGCAATCCAAGTGTTGGTGTATTACATGCTCTCACCAACAAATGCTCTTTCTTTGACTTCATACACCGATAAACTTTCTTTGCTTGCTTTGAAGGAAAAACTTACAAATGGTGTGCCAGATTCTCTGCCATCATGGAATGAATCTCAACATTTCTGTGATTGGCAGGGTGTTACATGTGGCCATCGTCACATGAGAGTCACTGTCTTGCATTTTGAAAATCAAACATGGGGTGGTACTCTTGGTCCATCCTTGGGAAATCTTACATTTCTCAGAATACTCAAACTTCAAAACCTCGCTTTGCATGGTGAAATTCCAGCTCAGATTGGTCGATTGAAGCGCTTGCAAATTCTTAACTTAAGAAATAACAAACTTCAAGGAGAGATTCCAAAAGAGCTTACTAACTGCACAAATATCAATGTATTTGATTTGCGGGAAAATCATCTCAAAGGAAGAGTTCCAACATGGTTTAGATCAATGAAGCAACTTATTACCTTGGCTCTTGAGAAGAATAATCTAGTTGGTACAATTCCATCTTCCCTACAAAATGTTTCATCACTCCAATGGCTAGCTCTTACAGAAAATCATTTGGAAGGAACCATACCTTATTCTATAGGTAAGTTGTCAAGTTTGAAACTACTCTATCTAGCTTTAAACAATTTTTCAGGCGAAATACCTCATTCTCTTTACAACCTATCAAATATTCTATATTTTGATCTGGGAGAAAATGATTTATTTGGTAGTCTTCCATCAAATCTAAATCTTATTTTTCCTAATCTTGTTGAATTCTTAGTAGGAGATAACCATATAACCGGAAACTTTCCTACATCAATTTCCAACCTAACCGATTTGGAAAGAATTGATATAGGAGAGAATTCTTTTAATGGTCCAATACCTAACACTTTGGGTCGATTAAATAAACTTGAGATTTTCTCTATCGGTTATAATAATTTTGGGAGTGGAAGAGCTCACGATTTGGACTTTCTTTCCTCATTATCCAACTGCACTAAATTGTCAATACTCGATTTTCAAGTTAATAGATTTGGTGGTGAATTTCCTGATCTTATAGGTAACTTTTCCACCAATCTTATTCGACTTGTTATGCAAGTTAATCAAATATATGGAGTGATACCTAAGCGAATTGGACAACTTACCGGGTTAACTTACTTAAACCTTGCAAATAATTTGTTTGAGGGAACAATTCCAGATTCAATTGGAAATCTTACAAATCTAATAAGATTGTCCTTGCAAGAAAACCAATTATCTGGAAATATTCCTACGAGTATTGGCAATCTTGCAGTCTTGTCTGAATTTTATCTAGCTGATAACAAATTAGAAGGACGCATTCCATTTACCCTCCGATATTGCACCCAAATGCAAAAATTAGATATTTGTGATAACAAACTGAGTGGTGAAATACCTAATCAAACATTTGGCTATCTAGAAGGTTTGATAAATTTGTTCTTATACAACAATTCGTTGACTGGTCTCATTCCTTCAGAGTTTAGTAATTTGAAGCATCTTTCACAATTGTATCTACACTCAAATAAGTTGTCTGGTGAAATTCCAAATGCTCTTGCTTCTTGCTTATCATTGACAGATCTTGGGTTGGGGAGAAACTTCTTACATGGAAGTATACCTTTATTCTTGACTTCTTTAAAATCCTTAGAAGTCTTAGACATTTCTTACAACAATTTCTCAAGTACAATCCCCTTTCAACTAGAAAACCTGACATTTTTGAATTATTTGGACTTGTCATTTAACAATTTGTATGGGGAAGTTCCCAAAGAAGGTGTCTTTAGCAATGCCACAACAGTTTCACTAATTGGAAATAAGAACCTTTGCGGTGGGATATCTGAATTGAAGCTTCCACCATGTTTGAAGACACCTTCCAAAAAACAGAAAAGATCTCAAAAAAAGAAACTTATCATAGTTAGTGTATTTAGTGGAATTTTGATCTCTTTCATAGCTTTTATGATTGTGCATTTTCTTACTAGAAAGTCCAAAAAGTTACCTTCTTCACCATCTCTGCTAAATAGGCCACTGAGAGTTACTTACGGAGAGTTACATGAAGCAACCAATGGATTTTCTTCAGCCAATTTGGTAGGGACAGGAAGTTTTGGATCTGTTTACAAAGGATCTCTTCTCAACTTTGAAAGACCTATTGCTGTAAAGGTGTTGAATCTTGAAACACGCGGGGCAGTAAAGAGTTTCGTGGCAGAGTGCAAAGCTCTAGGAAAGATGAAACACCGGAATCTTGTGAAGATCCTAACTTGTTGTTCAAGTGTTGATTACAACGGTGAAGATTTCAAGGCTATTGTTTTTGAGTTCATGTCTAATGGGAGTCTAGAAAAATTGTTGCATGATAATGAAGGATCTGAAAATCATAGTCTCAGTCTCTTACAAAGGGTAGACATTGCTCTTGATGTAGCCCATGCGTTGGATTATCTTCACCATGACGAAGACCAGGTTGTAGTTCATTGTGATATTAAGCCAAGCAATGTTCTTCTTGATGAAGATATTGTTGCCCATTTGGGAGACTTTGGTTTAGCTAGACTCATTCATGGAGCCGCCGAACATTCAAGTAAAGATCAAGTTAGTTCCTCAACAATTAAAGGAACTATAGGATATCTTCCTCCTGAGTACGGAGCAGGCGGTCCAGTATCATCGCAGGGAGATATCTACAGTTATGGAATTCTTCTATTAGAAATGCTCACTGGAAAGAGGCCAATAGATAACATGTTTTGTGAGAATGTAAGCCTACATCAATTTTGCAAGATGAAAATTCCAGAGCAAATTCTTGAGGTAGTGGATCAACGTTTGCTTGAGCCATTTGTTGAAGATCAAACAGGGATTGTGGAAAACAAGGTTAGGAAGTGTTTGGTGATGTTTACTCAAATAGGAGTTGCTTGTTCTGAAGAATTTCCTAACCAGCGGATGTTGATAAAAGATGTTATAGTTAGGTTGAATGAAATCAAATCAAGGTTGCCATGA 3024 0.3614 MRILMSCFLFFAIQVLVYYMLSPTNALSLTSYTDKLSLLALKEKLTNGVPDSLPSWNESQHFCDWQGVTCGHRHMRVTVLHFENQTWGGTLGPSLGNLTFLRILKLQNLALHGEIPAQIGRLKRLQILNLRNNKLQGEIPKELTNCTNINVFDLRENHLKGRVPTWFRSMKQLITLALEKNNLVGTIPSSLQNVSSLQWLALTENHLEGTIPYSIGKLSSLKLLYLALNNFSGEIPHSLYNLSNILYFDLGENDLFGSLPSNLNLIFPNLVEFLVGDNHITGNFPTSISNLTDLERIDIGENSFNGPIPNTLGRLNKLEIFSIGYNNFGSGRAHDLDFLSSLSNCTKLSILDFQVNRFGGEFPDLIGNFSTNLIRLVMQVNQIYGVIPKRIGQLTGLTYLNLANNLFEGTIPDSIGNLTNLIRLSLQENQLSGNIPTSIGNLAVLSEFYLADNKLEGRIPFTLRYCTQMQKLDICDNKLSGEIPNQTFGYLEGLINLFLYNNSLTGLIPSEFSNLKHLSQLYLHSNKLSGEIPNALASCLSLTDLGLGRNFLHGSIPLFLTSLKSLEVLDISYNNFSSTIPFQLENLTFLNYLDLSFNNLYGEVPKEGVFSNATTVSLIGNKNLCGGISELKLPPCLKTPSKKQKRSQKKKLIIVSVFSGILISFIAFMIVHFLTRKSKKLPSSPSLLNRPLRVTYGELHEATNGFSSANLVGTGSFGSVYKGSLLNFERPIAVKVLNLETRGAVKSFVAECKALGKMKHRNLVKILTCCSSVDYNGEDFKAIVFEFMSNGSLEKLLHDNEGSENHSLSLLQRVDIALDVAHALDYLHHDEDQVVVHCDIKPSNVLLDEDIVAHLGDFGLARLIHGAAEHSSKDQVSSSTIKGTIGYLPPEYGAGGPVSSQGDIYSYGILLLEMLTGKRPIDNMFCENVSLHQFCKMKIPEQILEVVDQRLLEPFVEDQTGIVENKVRKCLVMFTQIGVACSEEFPNQRMLIKDVIVRLNEIKSRLP 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02116 1007 SMART LRR_typ_2 491 514 IPR003591 -
Vivi7g02116 1007 SMART LRR_typ_2 394 417 IPR003591 -
Vivi7g02116 1007 SMART LRR_typ_2 218 242 IPR003591 -
Vivi7g02116 1007 SMART LRR_typ_2 587 612 IPR003591 -
Vivi7g02116 1007 SMART LRR_typ_2 563 584 IPR003591 -
Vivi7g02116 1007 SMART LRR_typ_2 122 146 IPR003591 -
Vivi7g02116 1007 SMART LRR_typ_2 418 442 IPR003591 -
Vivi7g02116 1007 SMART LRR_typ_2 515 539 IPR003591 -
Vivi7g02116 1007 PANTHER OS04G0122200 PROTEIN 216 1003 - -
Vivi7g02116 1007 SMART serkin_6 706 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02116 1007 ProSitePatterns Protein kinases ATP-binding region signature. 712 735 IPR017441 GO:0005524
Vivi7g02116 1007 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 71 336 - -
Vivi7g02116 1007 Pfam Protein kinase domain 709 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02116 1007 Gene3D Ribonuclease Inhibitor 181 333 IPR032675 -
Vivi7g02116 1007 Gene3D Ribonuclease Inhibitor 334 637 IPR032675 -
Vivi7g02116 1007 SUPERFAMILY Protein kinase-like (PK-like) 681 1001 IPR011009 -
Vivi7g02116 1007 Gene3D Ribonuclease Inhibitor 31 180 IPR032675 -
Vivi7g02116 1007 SUPERFAMILY L domain-like 32 328 - -
Vivi7g02116 1007 CDD STKc_IRAK 712 1002 - -
Vivi7g02116 1007 Gene3D Phosphorylase Kinase; domain 1 670 787 - -
Vivi7g02116 1007 Pfam Leucine rich repeat 396 455 IPR001611 GO:0005515
Vivi7g02116 1007 Pfam Leucine rich repeat 468 528 IPR001611 GO:0005515
Vivi7g02116 1007 Pfam Leucine rich repeat 148 207 IPR001611 GO:0005515
Vivi7g02116 1007 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 788 1007 - -
Vivi7g02116 1007 FunFam LRR receptor-like serine/threonine-protein kinase EFR 677 787 - -
Vivi7g02116 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Vivi7g02116 1007 SUPERFAMILY L domain-like 370 626 - -
Vivi7g02116 1007 ProSiteProfiles Protein kinase domain profile. 706 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02116 1007 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Vivi7g02116 1007 FunFam LRR receptor-like serine/threonine-protein kinase EFR 337 642 - -
Vivi7g02116 1007 Gene3D Transferase(Phosphotransferase) domain 1 788 1006 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02116 Vivi-Chr7 83376608 83379956 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02116 30 1005 Receptor kinase-like Gene Family AT3G47570 43.434 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi7g02116 Pkinase 7.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02116 - - mtr:25482466 1306.58