Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02113 ATGAGAATTGTAATGTCTTCTTTCCTCTTTTTTGCAATCCAAGTGTTGGTGTATTACATCCTCTCACAAACAAATGCTCTTTCTTTAACTTCATACACCGATAAACTCTCTTTGCTTGCTTTGAAGGAAAAACTTACAAATGGTGTGCCAGATTCTCTGCCATCATGGAATGAATCTCAACATTTCTGTGATTGGCAGGGTGTTACATGTGGCCATCGTCACATGAGAGTCACTGTCTTGCATTTTGAAAATCAGACATGGGGTGGTACTCTTGGTCCATCCTTGGGAAATCTTACATTTCTCAGAATACTCAAACTTCAAAACCTCGCTTTGCATGGTGAAATACCAGCTCAGATTGGTCGATTGAAGCGCTTGCAAGTTCTTAACTTAAGAAATAACAAACTTCAAGGAGAGATTCCTAAAGAGCTTGCTAACTGCACAAATATCCAAGTACTGGAGTTGTTGGAAAATCGGCTCACAGGGAGAGTTCCAATATGGTTTGGATCAATGAAGCAACTTACTACCTTGATTCTCGAGTGGAATAATCTAGTTGGTACAATTCCATCTTCCCTACAAAATGTTACATCACTCCAATATCTATCTCTCACAGATAATTACTTGGAAGGAACCATACCTTATTCTTTAGGTAAGTTGTCAAGTTTGACATACCTGACTTTAGCTTTAAATAATTTGTCAGGTGAAATCCCTCATTCTCTTTACAACCTATCAAATATTCAATATTTTGATCTTGGAGAAAACAAATTATTTGGTAGTCTTCCATCAAATATAAATCTTGTTTTCCCCAATCTTATTGCATTCTTAGTAGGACAAAACCATATATCAGGAAACTTTCCGAATTCAATATCCAACCTCACTGAATTGCAAAGATTTGTTATAGGAGGGAATTCTTTTAATGGGCCAATACCTCTCACTTTAGGTCAATTAAAGAAACTTGAGGTCTTTAATATTGGCGTTAACAATTTTGGAAGTGGAGGTGCTAGTGATTTGGACTTTCTATCTTCTTTAACAAACTCTACGCAACTGTCAACGATCATTTTGGGTCAAAATAAATTTGGTAGTAAGTTGCCCGACTTTATAGGAAACCTTTCTATCAATCTCGAGTATTTTGATTTAAGCGAAAATCAAATATATGGAGAGATACCTGAAAGAATTGGGCAACTAATTGGTTTAACATACTTAGATATTGGATACAATTCCTTGGAGGGAGCAATTCCAAATTCAATTGGAAAGCTTACTAATCTAGTTAGATTGGTTTTGGAAAAAAACAATTTATCTGGTAATATTCCTACAAATATTGGAAATCTTACTATCTTGTCTGAATTATATCTTTCAGCCAATAAATTGGAAGGAAATATTCCAGTTTCCCTGAGATATTGCACCCAATTGCAAATGTTAAGTATTAGTGAAAACAAATTGAGTGGTGATTTACCAAATCAGTTATTTAGACATCTAGATGGTTTAATATATATTGAATTGTACAACAACTCTTTGACTGCTCACATTCCCTCAGAGATTGGTAACTTGAAGCATCTTTCAAAATTGTATCTTGCCTCAAATAATTTGTCTGGTGAAATTCCAAAGGAACTTGCTGCTTGTTTGACATTAACAAGGCTTTGGTTGAAGGGAAACTTTTTTCATGGAGAAATACCATCCTTTTTGGGCTCTTTAAGATCCCTTGAAATCATAGATATTTCTAATAACAATTTCTCAAAAACAATCCCTTTTGAACTAAAAAACCTTATATTTTTGTATGTATTGGATTTATCTTTCAACAATCTCTATGGGGAGGTTCCCATAGGAGGTGTCTTTAGCAATGTCACAGCAATTTCCTTAATTGGAAACAAGAACCTTTGTGGAGGTATACCTCAATTGAAGCTTCCAAGATGTGTTAGGGCTTCTTCCAAGACAAACAAACATTCTCTAAAAAGGAAATTTATCATCATCAGTGTAATTGGCGGAGTTTTGATCTCTTTCATAGCTTTTACAATTGTCCATTTTCTCACAAGAAAGTCCAAAAAGTTACCTTCTTCGCCATCTCTTCAAAATAGGGCGCTAAGAGTTACTTACGGAGAGTTACATGAAGCAACCAATGGATTTTCTTCAGCCAATTTGGTAGGGACAGGAAGTTTTGGATCTGTTTACAAAGGATCTCTTCTCAACTTTGAAAGACCTATTGCTGTAAAGGTGTTGAATCTTGAAACACGCGGGGCAGTAAAGAGTTTCGTGGCAGAGTGCAAAGCTCTAGGAAAGATGAAACACCGGAATCTTGTGAAGATCCTAACTTGTTGTTCAAGTGTTGATTACAACGGTGAAGATTTCAAGGCTATTGTTTTTGAGTTCATGTCTAATGGGAGTCTAGAAAAATTGTTGCATGATAATGAAGGATCTGAAAATCATAGTCTCAGTCTCTTACAAAGGGTAGACATTGCTCTTGATGTAGCCCATGCGTTGGATTATCTTCACCATGACGAAGACCAGGTTGTAGTTCATTGTGATATTAAGCCAAGCAATGTTCTTCTTGATGAAGATATTGTTGCCCATTTGGGAGACTTTGGTTTAGCTAGACTCATTCATGGAGCCGCCGAACATTCAAGTAAAGATCAAGTTAGTTCCTCAACAATTAAAGGAACTATAGGATATCTTCCTCCTGAGTACGGAGCAGGCGGTCCAGTATCATCGCAGGGAGATATCTACAGTTATGGAATTCTTGTATTAGAAATGCTCACTGGAAAGAGGCCAATAGATAACATGTTTTGTGAGAATGTAAGCCTACATCAATTTTGCAAGATGAAAATTCCAGAGCAAATTCTTGAGGTAGTGGATCAACGTTTGCTTGAGCCATTTGTTGAAGATCAAACAGGGATTGTGGAAAACAAGGTTAGGAAGTGTTTGGTGATGTTTACTCAAATAGGAGTTGCTTGTTCTGAAGAATTTCCTAACCAGCGGATGTTGATAAAAGATGTTATAGTTAGGTTGAATGAAATCAAATCAAGGTTGCCATGA 3024 0.3634 MRIVMSSFLFFAIQVLVYYILSQTNALSLTSYTDKLSLLALKEKLTNGVPDSLPSWNESQHFCDWQGVTCGHRHMRVTVLHFENQTWGGTLGPSLGNLTFLRILKLQNLALHGEIPAQIGRLKRLQVLNLRNNKLQGEIPKELANCTNIQVLELLENRLTGRVPIWFGSMKQLTTLILEWNNLVGTIPSSLQNVTSLQYLSLTDNYLEGTIPYSLGKLSSLTYLTLALNNLSGEIPHSLYNLSNIQYFDLGENKLFGSLPSNINLVFPNLIAFLVGQNHISGNFPNSISNLTELQRFVIGGNSFNGPIPLTLGQLKKLEVFNIGVNNFGSGGASDLDFLSSLTNSTQLSTIILGQNKFGSKLPDFIGNLSINLEYFDLSENQIYGEIPERIGQLIGLTYLDIGYNSLEGAIPNSIGKLTNLVRLVLEKNNLSGNIPTNIGNLTILSELYLSANKLEGNIPVSLRYCTQLQMLSISENKLSGDLPNQLFRHLDGLIYIELYNNSLTAHIPSEIGNLKHLSKLYLASNNLSGEIPKELAACLTLTRLWLKGNFFHGEIPSFLGSLRSLEIIDISNNNFSKTIPFELKNLIFLYVLDLSFNNLYGEVPIGGVFSNVTAISLIGNKNLCGGIPQLKLPRCVRASSKTNKHSLKRKFIIISVIGGVLISFIAFTIVHFLTRKSKKLPSSPSLQNRALRVTYGELHEATNGFSSANLVGTGSFGSVYKGSLLNFERPIAVKVLNLETRGAVKSFVAECKALGKMKHRNLVKILTCCSSVDYNGEDFKAIVFEFMSNGSLEKLLHDNEGSENHSLSLLQRVDIALDVAHALDYLHHDEDQVVVHCDIKPSNVLLDEDIVAHLGDFGLARLIHGAAEHSSKDQVSSSTIKGTIGYLPPEYGAGGPVSSQGDIYSYGILVLEMLTGKRPIDNMFCENVSLHQFCKMKIPEQILEVVDQRLLEPFVEDQTGIVENKVRKCLVMFTQIGVACSEEFPNQRMLIKDVIVRLNEIKSRLP 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02113 1007 Pfam Leucine rich repeat 468 528 IPR001611 GO:0005515
Vivi7g02113 1007 Pfam Leucine rich repeat 124 183 IPR001611 GO:0005515
Vivi7g02113 1007 Pfam Leucine rich repeat 196 255 IPR001611 GO:0005515
Vivi7g02113 1007 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 788 1007 - -
Vivi7g02113 1007 Gene3D Ribonuclease Inhibitor 186 268 IPR032675 -
Vivi7g02113 1007 SMART LRR_typ_2 418 442 IPR003591 -
Vivi7g02113 1007 SMART LRR_typ_2 466 490 IPR003591 -
Vivi7g02113 1007 SMART LRR_typ_2 563 584 IPR003591 -
Vivi7g02113 1007 SMART LRR_typ_2 515 539 IPR003591 -
Vivi7g02113 1007 SMART LRR_typ_2 170 193 IPR003591 -
Vivi7g02113 1007 SMART LRR_typ_2 218 242 IPR003591 -
Vivi7g02113 1007 SMART LRR_typ_2 122 146 IPR003591 -
Vivi7g02113 1007 SMART LRR_typ_2 587 612 IPR003591 -
Vivi7g02113 1007 SMART LRR_typ_2 371 394 IPR003591 -
Vivi7g02113 1007 Gene3D Phosphorylase Kinase; domain 1 669 787 - -
Vivi7g02113 1007 SUPERFAMILY Protein kinase-like (PK-like) 681 1001 IPR011009 -
Vivi7g02113 1007 ProSitePatterns Protein kinases ATP-binding region signature. 712 735 IPR017441 GO:0005524
Vivi7g02113 1007 Gene3D Ribonuclease Inhibitor 31 185 IPR032675 -
Vivi7g02113 1007 Gene3D Ribonuclease Inhibitor 269 333 IPR032675 -
Vivi7g02113 1007 Pfam Protein kinase domain 709 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02113 1007 FunFam LRR receptor-like serine/threonine-protein kinase EFR 336 642 - -
Vivi7g02113 1007 Gene3D Transferase(Phosphotransferase) domain 1 788 1006 - -
Vivi7g02113 1007 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Vivi7g02113 1007 Pfam Leucine Rich Repeat 397 418 IPR001611 GO:0005515
Vivi7g02113 1007 CDD STKc_IRAK 712 1002 - -
Vivi7g02113 1007 SUPERFAMILY L domain-like 59 343 - -
Vivi7g02113 1007 SUPERFAMILY L domain-like 372 626 - -
Vivi7g02113 1007 FunFam LRR receptor-like serine/threonine-protein kinase EFR 677 787 - -
Vivi7g02113 1007 SMART serkin_6 706 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02113 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Vivi7g02113 1007 ProSiteProfiles Protein kinase domain profile. 706 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02113 1007 Gene3D Ribonuclease Inhibitor 334 645 IPR032675 -
Vivi7g02113 1007 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 71 335 - -
Vivi7g02113 1007 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 270 1000 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02113 Vivi-Chr7 83316337 83319670 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02113 29 1006 Receptor kinase-like Gene Family AT3G47570 43.333 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi7g02113 Pkinase 9.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02113 - - mtr:25482466 1310.82