Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02110 ATGAGGATTTGTATGATGTTTCTTCTCTGCTTTGCTACCCAAGTGTTGGTTTATTACATGAACTCAACCACAACATTTGCACTCTCTTTAAGCTCACAGACGGATAAGCTTGCTTTGCTAGCTTTGAAGGAAAAACTTACAAATGGCGTGCCGGATTCTCTACCATCATGGAATCATTCTTTGCATTTCTGTGATTGGGAGGGTGTCACATGTGGCCGCCGTCACATGAGAGTATCTGTCTTGCATTTGGAGAATCAAACTTGGGGTGGTACTCTTGGTCCATCCTTAGGAAATCTCACATTTCTCAGAAGACTCAAACTTCAAAACCTCGCTTTGCATGGTGAAATTCCAGCTCAGATTGGTCGTTTGAAGCGCTTGCAATTACTTAACTTAAGAAATAACAAACTTCAAGGAGAGATTCCAAAAGAGCTTACAAACTGCACAAATATCAAAGTATTGGAGTTGTTGGAAAATCGGTTCACAGGAAGAGTTCCCACATGGTTTGGATCAATGAAGCAACTTACTGCCTTGATTCTTGAGAACAACCATCTAGTTGGTACAATTTCATCTTCCCTACAAAATGTTTCATCACTCCAATATCTATCTCTTTTAGAAAATTATTTGGAAGGAACCATACCTTATTCTTTAGGTAAGTTGTCAAGTTTGAAATATCTGGCTTTAGCTTTAAATAGTAATTTGTCAGGTGAAATCCCTCCTTCTCTTTACAACCTATCAAATATTCAATGTTTTGATCTTGGAGGAAATGAGTTATATGGTAGTCTTCCATCAAATTTAGGTCATATTTTTCCCTATCTTGTAGAATTCCATGTAGTAGACAACTATATAATCGGGAATTTTCCCACTTCAATATCTAACCTCACTGATTTGCAAATATTTGATATAGGAGGGAATTATTTTAATGGGTCAGTACCTCTTACTTTGGGTCGATTAAATAAACTTGAATATTTAAATATCGAGAGTAATAATTTTGGAAGTGGAAGGACTAAAGATTTGGACTTTCTTTCTTCATTATCCAACTGTACTGAACTGTCAGCATTCTCTTTTCACATTAATAATTTTGGTGGTGAATTGCCGAGTCTTATAGGAAACTTTTCCACCCATCTTACTCGGCTTAGTATGCAAGTTAATCAAATATCTGGAGTGATACCTCAGAGAATTGGACAACTTACCGGGTTAACTTACTTAAGCCTTGGAAATAATTTGTTTGAGGGAACAATTCCAGATTCAATTGGAAGTCTTAAAAATCTAATAAGATTGGTCTTGCAAGATAACAAATTATCTGGCAATATTCCTATGAGTATTGGCAATCTTACTGTATTATCTGAGTTATATCTATCTCATAACAAATTAGAAGGACAGATTCCATTAACCCTTAGATATTGCACCCAAATGCAAAAATTAAGTATTTGCGATAACAAACTGAGTGGAGATATACCCAATCAAATATTTGGCTATCTAAAGAATTTAATATTTTTATACTTGTGCTCCAACTCATTCACTGGTCCCATTCCTTTAGAGTTTGGTAACTTGGATCATCTTTCACTATTGGATCTACACTCAAATAAGTTCACTGGTGAAATTCCCAAGGATCTCACTTCTTGTTTGACATTAACAGATCTCTTTTTAGGGGGAAACTTTTTCCATGGAGAAATACCTTCGTTCTTGGGATCTTTAAAGTCCTTAGAATTCATAGACATTTCTCACAACAATTTTTCAAGCACAATCCCTTTTGAACTAGAAAATCTGAAGTTTTTGATTATATTGAACTTGTCTTTCAACAATCTTTATGGCGAAGTTCCCATAAGAGGTGTCTTTAGCAATGCATCAGGAATTTCAGTAATTGGAAATAAGAACCTTTGTGGTGGGATATCTCAATTGAAGCTTCCACCATGTTTGGAGATACCTTCCAAGAAACACAAAAGATCTATAAAAAAGAAAATTATCATCATAAGTGTATTTGGTGGGATTTTGATCTCTTTCATAGCTTTAATAATTGTCCATTTTCTCACCAGAAAGTCCAAAAAGTTACCTTCTTCACCATCTCTTCAAAACAGGCCACTAAGAGTTACTTACGGAGAGTTACATGAAGCAACCAATGGATTTTCTTCAGCCAATTTGGTAGGGACAGGAAGTTTTGGATCTGTTTACAAAGGATCTCTTCTCAACTTTGAAAGACCTATTGCTGTAAAGGTGTTGAATCTTGAAACACGCGGGGCAGCAAAGAGTTTCGTGGCAGAATGCAATGCTTTAGGAAAGATGAAACACCGGAATCTTGTGAAGATCCTAACTTGTTGTTCAAGTGTTGATTGCAAGGGTGAAGATTTCAAGGCTATTGTTTTTGAGTTCATGCCTAATGGGAGTCTAGAAAATTTGTTGCATAATAATGAAGGGTCTGAAAATCATAGTCTCAACCTAACGCAGATGGTAGATATTGCTCTTGATATAGCTCATGCATTGGACTATCTTCACCATGATGAAGAGCAAGTTGTAATTCATTGTGATATCAAACCAAACAATGTTCTTCTTGATGAAGATATTGTAGCTCACTTGGGAGACTTTGGGATAGCTAGGCTCATTCATGGATCCACAGGACTTTCAAGTAAAGATCAAGTTGACTCATCAACCATTAAAGGAACCATAGGATATGTTCCTCCTGAGTATGGAGCAGGTGGTCCGGTAACACCAGAGGGAGATATCTACAGCTATGGAATTTTGTTGTTGGAAATGCTTACTGGAAAGAGACCAACAGATAATATGTTTTATGGAAATCTTTGTCTACACAAACTATGTAAGATGAAAATTCTTGAAGGAATTCTTGACATAGTAGATTCACGTTTGGTTATGCCATTTATTGAAGATCAGACATGGATTGTAGAAAACAACATAGAGGAGTGTTTAGTGATGTTTGCTAAAATAGGAGTTGCATGTTCTGAAGAATCTCCTACTCAGAGAATGCTCATAAAACATGTCATACTGAAGTTGCTAGGAATTAAACAGAAGTTGTCCAGCTAG 3033 0.362 MRICMMFLLCFATQVLVYYMNSTTTFALSLSSQTDKLALLALKEKLTNGVPDSLPSWNHSLHFCDWEGVTCGRRHMRVSVLHLENQTWGGTLGPSLGNLTFLRRLKLQNLALHGEIPAQIGRLKRLQLLNLRNNKLQGEIPKELTNCTNIKVLELLENRFTGRVPTWFGSMKQLTALILENNHLVGTISSSLQNVSSLQYLSLLENYLEGTIPYSLGKLSSLKYLALALNSNLSGEIPPSLYNLSNIQCFDLGGNELYGSLPSNLGHIFPYLVEFHVVDNYIIGNFPTSISNLTDLQIFDIGGNYFNGSVPLTLGRLNKLEYLNIESNNFGSGRTKDLDFLSSLSNCTELSAFSFHINNFGGELPSLIGNFSTHLTRLSMQVNQISGVIPQRIGQLTGLTYLSLGNNLFEGTIPDSIGSLKNLIRLVLQDNKLSGNIPMSIGNLTVLSELYLSHNKLEGQIPLTLRYCTQMQKLSICDNKLSGDIPNQIFGYLKNLIFLYLCSNSFTGPIPLEFGNLDHLSLLDLHSNKFTGEIPKDLTSCLTLTDLFLGGNFFHGEIPSFLGSLKSLEFIDISHNNFSSTIPFELENLKFLIILNLSFNNLYGEVPIRGVFSNASGISVIGNKNLCGGISQLKLPPCLEIPSKKHKRSIKKKIIIISVFGGILISFIALIIVHFLTRKSKKLPSSPSLQNRPLRVTYGELHEATNGFSSANLVGTGSFGSVYKGSLLNFERPIAVKVLNLETRGAAKSFVAECNALGKMKHRNLVKILTCCSSVDCKGEDFKAIVFEFMPNGSLENLLHNNEGSENHSLNLTQMVDIALDIAHALDYLHHDEEQVVIHCDIKPNNVLLDEDIVAHLGDFGIARLIHGSTGLSSKDQVDSSTIKGTIGYVPPEYGAGGPVTPEGDIYSYGILLLEMLTGKRPTDNMFYGNLCLHKLCKMKILEGILDIVDSRLVMPFIEDQTWIVENNIEECLVMFAKIGVACSEESPTQRMLIKHVILKLLGIKQKLSS 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02110 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672|GO:0006468
Vivi7g02110 1010 Gene3D Phosphorylase Kinase; domain 1 672 789 - -
Vivi7g02110 1010 Pfam Leucine rich repeat 125 184 IPR001611 GO:0005515
Vivi7g02110 1010 Pfam Leucine rich repeat 398 457 IPR001611 GO:0005515
Vivi7g02110 1010 Pfam Leucine rich repeat 470 530 IPR001611 GO:0005515
Vivi7g02110 1010 SMART LRR_typ_2 244 268 IPR003591 -
Vivi7g02110 1010 SMART LRR_typ_2 565 586 IPR003591 -
Vivi7g02110 1010 SMART LRR_typ_2 589 614 IPR003591 -
Vivi7g02110 1010 SMART LRR_typ_2 396 420 IPR003591 -
Vivi7g02110 1010 SMART LRR_typ_2 444 468 IPR003591 -
Vivi7g02110 1010 SMART LRR_typ_2 517 541 IPR003591 -
Vivi7g02110 1010 SMART LRR_typ_2 123 147 IPR003591 -
Vivi7g02110 1010 SUPERFAMILY Protein kinase-like (PK-like) 683 1002 IPR011009 -
Vivi7g02110 1010 SMART serkin_6 708 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02110 1010 SUPERFAMILY L domain-like 372 628 - -
Vivi7g02110 1010 Gene3D Ribonuclease Inhibitor 30 230 IPR032675 -
Vivi7g02110 1010 Pfam Protein kinase domain 711 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02110 1010 SUPERFAMILY L domain-like 58 370 - -
Vivi7g02110 1010 ProSiteProfiles Protein kinase domain profile. 708 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02110 1010 PANTHER LEUCINE RICH REPEAT KINASE 2 342 1006 - -
Vivi7g02110 1010 Gene3D Ribonuclease Inhibitor 231 337 IPR032675 -
Vivi7g02110 1010 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Vivi7g02110 1010 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 790 1010 - -
Vivi7g02110 1010 Gene3D Transferase(Phosphotransferase) domain 1 790 1010 - -
Vivi7g02110 1010 ProSitePatterns Protein kinases ATP-binding region signature. 714 737 IPR017441 GO:0005524
Vivi7g02110 1010 Gene3D Ribonuclease Inhibitor 338 647 IPR032675 -
Vivi7g02110 1010 FunFam LRR receptor-like serine/threonine-protein kinase EFR 679 789 - -
Vivi7g02110 1010 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 73 339 - -
Vivi7g02110 1010 FunFam LRR receptor-like serine/threonine-protein kinase EFR 340 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02110 Vivi-Chr7 83261054 83264691 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02110 30 1008 Receptor kinase-like Gene Family AT3G47570 42.886 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi7g02110 Pkinase 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02110 - - mtr:25482466 1196.42