Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02075 ATGGAAGATAATAGTATCAATATGTCAGGCTTTTGCATGAGATCTGGAAGTAGTACTAGCAGTGGCACGAAGTGTGGACGTTGGAATCCAACGACAGAACAAGTTAAACATCTGACTCAACTTTTTAGAGCAGGGCTCAGAACTCCAAGCACTGATCAAATTCAAAAGATATCAAATCAGCTCAGTTTTTATGGTAAGGTTGAGAGCAAGAACGTGTTCTATTGGTTTCAAAATCATAAGGCTAGGGAAAGACAAAAACGTCGAAAGGTTTCTTTTGATGATGACAACAAGGATGTCACAGCTCATCATAGAGACAACTCCATGCATGCTTCTACACAACAACTTGTTGAGATGTACTCGGAGCCTAATAGGGTGATTGAGACTCTTGAGCTTTTTCCATTGAACTCCTTTGGGGAATCAGAATCAGAGAAGTTGAGTATGCATGTAAATGAAAGCATGGAAAGTTCAATATTTGCATACACGTGTACAATGGGTGAACAAATAGAGCATCCACCATTAGACTTGCGGTTGAGCTTTGTGTGA 543 0.3996 MEDNSINMSGFCMRSGSSTSSGTKCGRWNPTTEQVKHLTQLFRAGLRTPSTDQIQKISNQLSFYGKVESKNVFYWFQNHKARERQKRRKVSFDDDNKDVTAHHRDNSMHASTQQLVEMYSEPNRVIETLELFPLNSFGESESEKLSMHVNESMESSIFAYTCTMGEQIEHPPLDLRLSFV 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02075 180 MobiDBLite consensus disorder prediction 1 26 - -
Vivi7g02075 180 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 15 111 IPR044555 GO:0003700|GO:0099402
Vivi7g02075 180 CDD homeodomain 27 87 IPR001356 GO:0003677
Vivi7g02075 180 FunFam WUSCHEL-related homeobox 11 24 92 - -
Vivi7g02075 180 SUPERFAMILY Homeodomain-like 26 88 IPR009057 -
Vivi7g02075 180 ProSiteProfiles 'Homeobox' domain profile. 21 86 IPR001356 GO:0003677
Vivi7g02075 180 SMART HOX_1 23 90 IPR001356 GO:0003677
Vivi7g02075 180 MobiDBLite consensus disorder prediction 85 109 - -
Vivi7g02075 180 Pfam Homeodomain 25 85 IPR001356 GO:0003677
Vivi7g02075 180 Gene3D - 24 92 - -
Vivi7g02075 180 MobiDBLite consensus disorder prediction 87 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02075 Vivi-Chr7 82730802 82731685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02075 5 180 Wox Gene Family AT3G11260 53.476 8.07e-61 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vivi7g02075 Homeodomain 2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02075 - - cam:101494967 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04282 3 76531058 76531899 Vivi7g02075 7 82730802 82731685 ECH
Vivi7g02075 7 82730802 82731685 Vivi7g02075 7 82730802 82731685 ECH
Vivi3g04282 3 76531058 76531899 Vivi7g02075 7 82730802 82731685 PCT