Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02064 ATGGTGAAGAATGATGATACTTCCAAGGGATGCTCCATTTTTAATGGGACAATATCTGCAACCTCCCATCCTTCAACTTGTCCATGGCGCATGCTTCAGATCCCAATATCTGGCAGAAATTCGCCGGAGATTCCTTCACTGTTCCCAAACTCCATTCCAAAGTATACTATTTCCCTCAAGGTCATTTACAACACTCACACACTTGCAGATCCGCTCATTCTCTGTACAGTCTCCGCCGTCGATCTACTTGCAGATCCTGAAACTCAACAAGTTTATGCAAAATTACTCCTCACTTCTGTAATTGACGGAAGTGTTGTTCCTCTTGAGGCTAGCAACGAAGAGGATGTTGATCAGATTGTTTCATATGCTAAGACTCTAACCAGATCTGATGTTAAAAGCCGAAGTGTACTCTACGTACCTGCGGCCTGTGCCAAATCGATCTTCCCAGCACTCCCGCGGTTTGATTCTAGAAACCAATCTCCATTTCAAGATCTCTTCCTCACTGAAGTTTGCGGTGTAGTCTGGAAATTTCGCTATGTCTTCCGTGGGTATACCTTACGTCACCTGTTCACCACTGGTTGGAGTGGATTTGTCCGTGAAAAGAAACTCGTACGCGGTGATACCATTGTTTTTATTAAAAACTCGGCTGGAAATATCTCTGTAGGAATTCGCAGGAAAATGAATCTTCCTTCCACTGTTAAAATAACGGAAAAGGAAGTTAACGAGGCTGCAGAATTGGCAGAGAAGAACGCAGCTTTTGAGGTTGTGTACTATCCGACGGTAGGTGGTTTTGATTTTGTGGTGGGAGCTAAGATAGTGGAGGATGCAATGAAGGTTAATTGGAGACGTTGGATGAGAGTTACACACATGGTGAAGAATGATGATACAACAAATGGATGTTCCATTTTTCATGGCACAATATCTAATCTCTCAACTCCCGTAACTCGTCCATGGCGCATGCTTCAGATTGAATGGGATGAACCTCATGTCTCTGAGAATCTAGAGCAATTATGTCCTTGGCAGGTTGAAGTTATTTCTAACTCACTTACACCAGATATACAGTTTCCCCTAACAAAAAAAGTTAAGAGCTGCTCAAGATTCTGTGTTATCAAGTGA 1116 0.4283 MVKNDDTSKGCSIFNGTISATSHPSTCPWRMLQIPISGRNSPEIPSLFPNSIPKYTISLKVIYNTHTLADPLILCTVSAVDLLADPETQQVYAKLLLTSVIDGSVVPLEASNEEDVDQIVSYAKTLTRSDVKSRSVLYVPAACAKSIFPALPRFDSRNQSPFQDLFLTEVCGVVWKFRYVFRGYTLRHLFTTGWSGFVREKKLVRGDTIVFIKNSAGNISVGIRRKMNLPSTVKITEKEVNEAAELAEKNAAFEVVYYPTVGGFDFVVGAKIVEDAMKVNWRRWMRVTHMVKNDDTTNGCSIFHGTISNLSTPVTRPWRMLQIEWDEPHVSENLEQLCPWQVEVISNSLTPDIQFPLTKKVKSCSRFCVIK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02064 371 SMART B3_2 122 227 IPR003340 GO:0003677
Vivi7g02064 371 SUPERFAMILY DNA-binding pseudobarrel domain 118 226 IPR015300 -
Vivi7g02064 371 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 69 351 IPR044835 GO:0003677|GO:0006355|GO:0009725
Vivi7g02064 371 Gene3D - 119 227 IPR015300 -
Vivi7g02064 371 Gene3D - 283 349 - -
Vivi7g02064 371 CDD B3_DNA 121 225 IPR003340 GO:0003677
Vivi7g02064 371 ProSiteProfiles B3 DNA-binding domain profile. 122 227 IPR003340 GO:0003677
Vivi7g02064 371 Pfam Auxin response factor 243 321 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Vivi7g02064 371 Pfam B3 DNA binding domain 123 226 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02064 Vivi-Chr7 82589893 82597125 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02064 71 347 B3 DNA Binding Superfamily AT4G30080 36.667 3.21e-58 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Vivi7g02064 B3 1.9e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02064 - - vvo:131619495 740.339