Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02041 ATGGCACATCGAAGAGCGAAATTGCTGTTCCTTCTCTGCGCTCTTTGTTATGCACTCAATTCCTTTGCCGCAAAGAGCTATTACTATATACTGCAAGTGTCGAAGAGTGCGGGAAACCAACAAGGAAAATGCAGCTGGAAGAATGATACTCATATTGAGAAACATGCTAAATCCTCTTGCTATTATGGGATTTGCCCAGATGGTTCATTTGATTATTTCTCAAATTGTTCTCTTCACAAAATTCTTCAAAATAACAATGTTAACTCATCTTCACTTTTACAACTTATTTTTGCAGGTAAACAGAACTTGACGAGGAAACTCGTCATTGCATTTGCAGTGATCATAGCCATATATTTCTATAAGCGGAAGTCATATGTACAATCTCGCAGCCTCTCTTCTGAGCTCACTTCAAAGGATCTTGAAAGTGGAAGTCAACACTTATCATTTGGAGTCAACACTTATCATTTTAGTTATAGTGAACTTGAAGAAGCCACAAACAACTTTGATCCATCCAAAGTGCTGGGAAAAGGAGCCTTTGGGACGGTGTATTACGGAAAACTTAATGATGGGCGTAGTGTTGCGGTGAAGAAGTTACTTGAGAAAAATAATGACAAAAGAGTTGAGCAATTCAAGAATGAAGTTGAAATCATGGCATCATTAGTCCATGAAAATCTTGTGTCTCTATATGGATGCACTTCACTTCACAGTCGCGAGCTTCTACTTGTCTATGAGTATGTTTCTAATGGAACCGTTGCTGATCATCTCCGTGGTAAAGAAGCAAAACATGGAAAACTTACTTGGCCTATTAGAATGAATATTGCTGTGGAGACAGCAAAGGCGTTGGAGTATCTTCATACATCTAAAATCATTCACAGAGATATTAAAACAAATAATATTCTGTATGTCTGTGGATAA 915 0.3781 MAHRRAKLLFLLCALCYALNSFAAKSYYYILQVSKSAGNQQGKCSWKNDTHIEKHAKSSCYYGICPDGSFDYFSNCSLHKILQNNNVNSSSLLQLIFAGKQNLTRKLVIAFAVIIAIYFYKRKSYVQSRSLSSELTSKDLESGSQHLSFGVNTYHFSYSELEEATNNFDPSKVLGKGAFGTVYYGKLNDGRSVAVKKLLEKNNDKRVEQFKNEVEIMASLVHENLVSLYGCTSLHSRELLLVYEYVSNGTVADHLRGKEAKHGKLTWPIRMNIAVETAKALEYLHTSKIIHRDIKTNNILYVCG 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02041 304 SUPERFAMILY Protein kinase-like (PK-like) 145 300 IPR011009 -
Vivi7g02041 304 Gene3D Transferase(Phosphotransferase) domain 1 244 303 - -
Vivi7g02041 304 SMART serkin_6 168 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02041 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Vivi7g02041 304 Pfam Protein tyrosine and serine/threonine kinase 171 300 IPR001245 GO:0004672|GO:0006468
Vivi7g02041 304 ProSiteProfiles Protein kinase domain profile. 168 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02041 304 FunFam Somatic embryogenesis receptor kinase 1 137 245 - -
Vivi7g02041 304 Gene3D Phosphorylase Kinase; domain 1 139 243 - -
Vivi7g02041 304 ProSitePatterns Protein kinases ATP-binding region signature. 174 197 IPR017441 GO:0005524
Vivi7g02041 304 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 40 300 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02041 Vivi-Chr7 82083649 82085119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02041 83 300 Receptor kinase-like Gene Family AT1G25390 52.055 4.86e-60 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Vivi7g02041 PK_Tyr_Ser-Thr 1.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02041 - - vvo:131619488 589.726