Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02024 ATGATTACCAAGGACTTCATGGCCTTGTTGCCTTCCCTTTTACCTTTTCCAAAATTATGCTTGAACAACACGTTAATCGAAAGCCTTGTGAAGGGAAATATTGATCTTTGTGAAGGAATTGGAGGAGAAGATGAAGCATTAAGAGCGGGTGCTATAGGTGTGTTGATGTTGGTCCCCACTTTACCCGATCACGTAGAATCTTACCCCTTGCCAGCATGCTTTATTCGAAAGAAAGATGCCTCTAAAATATTTAAATACATTAGTTCCACAAGGAATCCAGTAGCAATAATATTCAAGACTTATGTGTTAAATGATACTTCGGCACCCGTGGTTGCCAGTTTCTCATCTAGGGGTCCAAACACCGTTATGTCTGATATATTGAAGCCCGATTTATCCGCTCCTGGTGTAGATATTTTAGCTAGTTGGCCTTCAAATAGTCCTATCTCTGAAAATCCCAAAGAAACAAGAAAATTGGAGTTTAATATATTATCAGGAACATCTATGGCATGTCCGCATGTGTCTGGGGCAGCAGCATACCTCAAGTCATTCCATCCTACATGGTCTCCTGCTGCTATCCGTTCGGCTCTAATGACGACAGCTAAAAAGATGAGCCCTACAAAAAATAAAGATGCGGAGTTTGGTTATGGAGCCGGTGAAGTTGATCCTGTGAAAGCATTGCATCCTGGTTTAATATATGACGCTAATGTAGACGATTATATTAAGCTTCTATGTGGATATGGCTTGACTACAACCACTCTAAGAACACTCACCGAAGATGATAGCAATTGCTCGAAAATAACACCTATATCAGCAAGAGATTTAAACTATCCATCATTTGCTTTAAAAGTCTCACATCCTAGACAACATATTAGTGGGAGATTCCGTAGGACTGTCACCAATGTTGGAACACCAGTCTCTACTTATAGAGCAGTTGTGACAGTTCCTAAAGGATTACATATTTATGTGATTCCAAGGGTTTTGTCTTTCACTTCGCTGGGAGAAAACCACACGTATGTTGTCATTGTGGATGGAGTATTGAAGAAACCTATTGAATCTGCTTCAATAACTTGGGATGATGGATATTTTAAAGTCAGAAGTCCAATTGTTGTTTTCGACGATCGAGCCGAGAAAGTTGCAACATCTCTAAATTCCGACAGAAAATTTGTTATCATTACTGTTGTTGTTATTTTTTGTATTAATTTTATTATTTTTGCTATTAGTTTTATTAGATTTATGGGGTGGTGTACTTTTCTGTAA 1257 0.3858 MITKDFMALLPSLLPFPKLCLNNTLIESLVKGNIDLCEGIGGEDEALRAGAIGVLMLVPTLPDHVESYPLPACFIRKKDASKIFKYISSTRNPVAIIFKTYVLNDTSAPVVASFSSRGPNTVMSDILKPDLSAPGVDILASWPSNSPISENPKETRKLEFNILSGTSMACPHVSGAAAYLKSFHPTWSPAAIRSALMTTAKKMSPTKNKDAEFGYGAGEVDPVKALHPGLIYDANVDDYIKLLCGYGLTTTTLRTLTEDDSNCSKITPISARDLNYPSFALKVSHPRQHISGRFRRTVTNVGTPVSTYRAVVTVPKGLHIYVIPRVLSFTSLGENHTYVVIVDGVLKKPIESASITWDDGYFKVRSPIVVFDDRAEKVATSLNSDRKFVIITVVVIFCINFIIFAISFIRFMGWCTFL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02024 418 ProSitePatterns Serine proteases, subtilase family, serine active site. 165 175 IPR023828 -
Vivi7g02024 418 ProSiteProfiles Serine proteases, subtilase domain profile. 1 226 - -
Vivi7g02024 418 Pfam Fibronectin type-III domain 273 370 IPR041469 -
Vivi7g02024 418 CDD PA_subtilisin_like 16 97 - -
Vivi7g02024 418 Gene3D - 18 104 - -
Vivi7g02024 418 SUPERFAMILY Subtilisin-like 108 253 IPR036852 GO:0004252|GO:0006508
Vivi7g02024 418 Pfam Subtilase family 107 216 IPR000209 GO:0006508|GO:0008236
Vivi7g02024 418 Gene3D Peptidase S8/S53 domain 105 239 IPR036852 GO:0004252|GO:0006508
Vivi7g02024 418 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 18 370 IPR045051 -
Vivi7g02024 418 Gene3D - 243 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02024 Vivi-Chr7 81494215 81497144 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02024 18 371 Subtilisin-like Serine Gene Family AT5G59100 44.875 5.56e-94 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02024 - - vvo:131619474 783.482