Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02020 ATGAGTGCACAAGGACAGCCACAAGTTCAACCACAAGTTCAAGGGATTGATGAAGCGGTGCTGGACGACATTATCCGCCGACTCACTGAGGTCCGATTGTCCCGACCCGGAAAGCAAGTCCAGCTCTCTGAGGCTGAGATCAAGCAACTTTGTCTTGCTTCTAGAGATATCTTCCTTCAGCAACCTAATTTGCTTGAACTTGAAGCCCCTATCAAGATTTGTGGTGACATTCATGGGCAGTACAGTGATTTGTTAAGGCTCTTTGAGTATGGGGGTTTGCCTCCTAAATCTAATTATCTCTTTTTAGGAGACTACGTCGATCGTGGCAAGCAGAGCTTAGAAACCATATGTCTTTTGCTTGCTTATAAAATCAAATATCCTGAAAACTTTTTCCTTCTGAGGGGAAATCATGAGTGCGCTTCCATCAATAGGATATATGGATTTTACGATGAATGTAAACGAAGGTTTAACGTGAGGCTTTGGAAAGCTTTTACCGACTCTTTTAACTGCCTTCCTGTTGCAGCTCTCATAGATGATAAGATATTGTGCATGCATGGCGGTCTTTCCCCCGATCTCACTAATTTGGATCAAATCAGGATTCTGCCTCGTCCCGTTGCTATCCCTGACACTGGTTTGCTATGTGATTTGCTTTGGTCTGATCCTGGTAGAGACGTGAAGGGTTGGGGTATGAATGATAGAGGAGTGTCGTACACCTTTGGTCCTGATAAGGTGGCTGAATTTTTGACAATGCACGACTTGGACCTTATTTGCCGTGCTCATCAGGTTGTAGAGGATGGATATGAATTCTTTGCAGACAGGCAACTTGTTACGATTTTTTCAGCTCCAAACTACTGTGGTGAATTTGACAATGCTGGTGCAATGATGAGTGTTGACGAAAACTTGATGTGTTCCTTCCAGATTCTTAAACCTGCAGAGAAAAAGACAAAGTTCGTGATGTCAAACAAGATGTGA 972 0.4342 MSAQGQPQVQPQVQGIDEAVLDDIIRRLTEVRLSRPGKQVQLSEAEIKQLCLASRDIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPKSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDSFNCLPVAALIDDKILCMHGGLSPDLTNLDQIRILPRPVAIPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVAEFLTMHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKTKFVMSNKM 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02020 323 Gene3D - 14 321 IPR029052 -
Vivi7g02020 323 SMART pp2a_7 42 312 IPR006186 GO:0016787
Vivi7g02020 323 Pfam Serine-threonine protein phosphatase N-terminal domain 21 68 IPR031675 -
Vivi7g02020 323 CDD MPP_PP1_PPKL 20 310 - -
Vivi7g02020 323 FunFam Serine/threonine-protein phosphatase 68 321 - -
Vivi7g02020 323 PRINTS Serine/threonine phosphatase family signature 99 126 IPR006186 GO:0016787
Vivi7g02020 323 PRINTS Serine/threonine phosphatase family signature 166 192 IPR006186 GO:0016787
Vivi7g02020 323 PRINTS Serine/threonine phosphatase family signature 70 97 IPR006186 GO:0016787
Vivi7g02020 323 PRINTS Serine/threonine phosphatase family signature 252 272 IPR006186 GO:0016787
Vivi7g02020 323 PRINTS Serine/threonine phosphatase family signature 274 290 IPR006186 GO:0016787
Vivi7g02020 323 PRINTS Serine/threonine phosphatase family signature 132 156 IPR006186 GO:0016787
Vivi7g02020 323 PRINTS Serine/threonine phosphatase family signature 195 222 IPR006186 GO:0016787
Vivi7g02020 323 ProSitePatterns Serine/threonine specific protein phosphatases signature. 133 138 IPR006186 GO:0016787
Vivi7g02020 323 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 24 315 - -
Vivi7g02020 323 Pfam Calcineurin-like phosphoesterase 70 262 IPR004843 GO:0016787
Vivi7g02020 323 SUPERFAMILY Metallo-dependent phosphatases 29 316 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02020 Vivi-Chr7 81402903 81407189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02020 49 255 Calmodulin-binding Proteins AT5G63870 30.242 1.07e-25 102