Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01996 ATGTTAGGCCTTACACAAGTAACCGCTAGAGGGGGAGTTCCGTCAATACGCATTGCCGTATATAAAGTGTGTTGGTCTGGTGGATGCAAAGAAGCAAGTATTCTTGTCGCATTTGATAATGCAACTAAAGATTTAGTTCATATATTATCTGTATCAATTAGTGAAAGTGTTTCAAAAAAGAATATATATTTTAAAGATGTATTATCGGTTGGATCTTTCCATGCCATGAAACACGGTGTGTTGACAGTATTTTCATTCGGGAACGCAGGTCCATATCCTAAATCCTTACAAAATTATCAACCTTGGACAATTATTGTTGGTTCTATCACCTGGGATATGAAGTTTGTAACCAAAGTTAAAACAGGAAACAATATAACTTATGAGACCAACTCTTTGGATGATAAGCTAGTAAACGGAAAAATTGTTTTATGGGAAGGAGATATAGGAGTCGCAGAAGCCTTTAGGGTAGGTATAGTTGGTGGCTTGATGCAAGAGCAAGCTTATATTGATATCGTTGTCTCTTTTACGTTGCCAACATGTTATCTTCAATTAAAAGATGTCGCAGAAATACATTGCTTTCCTACTGCAACCATATTTAAGACCATTGAGCTAAAGGATAGTTTGACATCTGTTGTTGCCTCTTTTTCATCAAGGGGTCCAGACAACACTACACCTGAAATTTTGAAGTTTCGCGACTTAATTGCTCCTACAGTTGACATCATGGCTAGTTGGTCTCAAATTTCTGATAGTAATGGTGAGACCAAAAAGTTTATGTTCAACATTATATTGGGAACATCAATGGCATGCCCTCATGTATCCGGAGCAACGACAAATATAAAGTCATTCCATCCTACATGGTCACTTGTTGCTATTTGGTCAGCTCTTATTACAACAGTTGCACCTATCAGTTCAAAAAATAACCAAGATGCAGAATTTGCTTATGGAGCTGGCCAAATTGACCCTGTCAAAGTTGTTAATCCGGGTCTAATATAA 993 0.3726 MLGLTQVTARGGVPSIRIAVYKVCWSGGCKEASILVAFDNATKDLVHILSVSISESVSKKNIYFKDVLSVGSFHAMKHGVLTVFSFGNAGPYPKSLQNYQPWTIIVGSITWDMKFVTKVKTGNNITYETNSLDDKLVNGKIVLWEGDIGVAEAFRVGIVGGLMQEQAYIDIVVSFTLPTCYLQLKDVAEIHCFPTATIFKTIELKDSLTSVVASFSSRGPDNTTPEILKFRDLIAPTVDIMASWSQISDSNGETKKFMFNIILGTSMACPHVSGATTNIKSFHPTWSLVAIWSALITTVAPISSKNNQDAEFAYGAGQIDPVKVVNPGLI 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01996 330 Pfam Subtilase family 9 317 IPR000209 GO:0006508|GO:0008236
Vivi7g01996 330 ProSiteProfiles Serine proteases, subtilase domain profile. 1 325 - -
Vivi7g01996 330 SUPERFAMILY Subtilisin-like 7 329 IPR036852 GO:0004252|GO:0006508
Vivi7g01996 330 ProSitePatterns Serine proteases, subtilase family, serine active site. 264 274 IPR023828 -
Vivi7g01996 330 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 330 IPR045051 -
Vivi7g01996 330 Gene3D Peptidase S8/S53 domain 206 330 IPR036852 GO:0004252|GO:0006508
Vivi7g01996 330 Gene3D Peptidase S8/S53 domain 3 111 IPR036852 GO:0004252|GO:0006508
Vivi7g01996 330 Gene3D - 131 205 - -
Vivi7g01996 330 Gene3D - 112 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01996 Vivi-Chr7 80728354 80730702 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01996 3 330 Subtilisin-like Serine Gene Family AT5G59190 37.831 7.05e-70 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01996 - - vvo:131619460 661.759