Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01967 ATGGCTGAGATTTGTTGTGGTGTTGTTGGAGCTGGAGAAACTCCTACTACAAATATTGAACCAAACTCCCGAACTTCCCGTCGCCGGAGTTTGGATTTTCTTCCGTTGAAATACATAGCTAACGTGGCAATTCCACCGGAGAATATTTCCCGGAAACGTCAGAAGCTAGATCTACTTGTTTCTCTCCCTCCACCGCGGGAGTTTGAGAACACGATTGATAGATGTGAGGAATCAAATGAAAACGAAGTTGTTGCTGTTCCGAATTGTGTGAATGTTTCTGATTTAGAAAACGAGGTTACCGTTGCTGAAGAGTGTCCTAAGTATGGAATAACATCGGTTTGTGGAAGGAGACGAGACATGGAAGATGCTGTTTCGGTGCATCCTTCTTTTTGTAAAGAAAAGAATGAACAAAATCAGAAACCGTTTCATTTCTTTGGTGTCTACGACGGTCACGGTTGCTCACATGTTGCAACTATGTGTAAACAAAGGTTACATGAAATCATTGATGATGAGGTAAACAAAGAGAAAGAGAAAGTTGACTGGAAGTCAACGATGGAGAAGAGTTTCATTCGGATGGACGAAGAGGTTTTGAAATCTAGCAAAACTACTCAAAGCTTTACATGCAAGTGTGAGCTTCAAACTCCTCACTGCGACGCCGTTGGCTCCACCGCGGTCGTCGCGGTTGTCACGCCGGAGAAAATCATTGTCTCTAACTGTGGAGATTCACGCGCCGTTCTTTGCCGTAACGGCGTCGCCATTCCTCTTTCCTCCGATCACAAGCCGGATCGACCCGATGAGTTGGATCGGATCAACTCAGCTGGAGGACGTGTGATCTATTGGGATGGTGCAAGAGTGCTTGGAGTGTTGGCCATGTCAAGAGCCATTGGGGACAATTATTTGAAGCCATATGTTATTTCGGAACCTGAGATAACTGTAACAGAGAGGAGTGACGAGGATGAATGTTTGATTCTGGCTAGTGATGGGTTATGGGACGTGGTGCAAAACGAGACGGCGTGTAGGGTAGTGCAGATGTGTCTCAAGGCGGAGAAGACGGTGTCGCCGCCGGGGTCTCCGGGGAGTGATGTGGTGGGAGATGGATCAGATAAGGCTTGTTCCGATGCTTCAATTTTGTTGACGAAATTGGCGTTGGCGAGGCATAGTTCGGACAATGTAAGCGTGGTGGTTGTTGATTTGAGGAGACATCAACGTCAACGATAA 1218 0.4655 MAEICCGVVGAGETPTTNIEPNSRTSRRRSLDFLPLKYIANVAIPPENISRKRQKLDLLVSLPPPREFENTIDRCEESNENEVVAVPNCVNVSDLENEVTVAEECPKYGITSVCGRRRDMEDAVSVHPSFCKEKNEQNQKPFHFFGVYDGHGCSHVATMCKQRLHEIIDDEVNKEKEKVDWKSTMEKSFIRMDEEVLKSSKTTQSFTCKCELQTPHCDAVGSTAVVAVVTPEKIIVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELDRINSAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVISEPEITVTERSDEDECLILASDGLWDVVQNETACRVVQMCLKAEKTVSPPGSPGSDVVGDGSDKACSDASILLTKLALARHSSDNVSVVVVDLRRHQRQR 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01967 405 PANTHER PROTEIN PHOSPHATASE 80 398 IPR015655 GO:0004722|GO:0006470
Vivi7g01967 405 CDD PP2Cc 107 349 IPR001932 -
Vivi7g01967 405 ProSiteProfiles PPM-type phosphatase domain profile. 107 398 IPR001932 -
Vivi7g01967 405 SMART PP2C_4 90 396 IPR001932 -
Vivi7g01967 405 FunFam Protein phosphatase 2C 37 102 405 - -
Vivi7g01967 405 Gene3D - 94 405 IPR036457 -
Vivi7g01967 405 Pfam Protein phosphatase 2C 107 390 IPR001932 -
Vivi7g01967 405 SUPERFAMILY PP2C-like 106 399 IPR036457 -
Vivi7g01967 405 ProSitePatterns PPM-type phosphatase domain signature. 144 152 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01967 Vivi-Chr7 80004095 80006006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01967 78 404 PP2C-type Phosphatase Gene Family AT1G07430 60.511 4.87e-150 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01967 K14497 - gmx:100776356 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g01967 7 80004095 80006006 Vivi7g01967 7 80004095 80006006 ECH