Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01961 ATGGCGAATCGGTGGTGGGATGGAAGACAACCGGAAGCAAACCCGAACCCGGTTGAAGGTTCGAACCAAACCGGTTCGAACCGGATTGTGTCACGAAGGGAGCAAGAGTTCATGGAAAGCAACACCAACAACAACAGTAACAGTAACATTACTCCAACGATGAGCAACAACAGCACCGTCAACGTTAACGGAGAAGACAATGACCGTGACGGCGATGACCAGAACACCGGAAGTGGCCGCCGTCCCCGCGGCCGACCTCCAGGTTCGAAGAACAAACCGAAGCCTCCGGTGGTGATAACCAAAGAAACACCAAACGCGCTTCGTAGCCACATCCTGGAAATCTCCAGCGGAAGCGATGTTGCTGAGAGTATTTCCACTTTTGCTAACCGTCGTCACCGCGGTGTTTCGGTTCTCAGCGGCACCGGCGTTGTTACCAATGTGACTCTCCGGCAACCAACTGCTCCGGGAGGTATCATTGCTCTTCAAGGGAGGTATGACATTCTGTCACTCTCTGGAGCTTTTTTGCCTCCGCCGTCTCCACCGGAGGCGACCGGGCTGACGGTCTATCTCGCCGGAGTTCAAGGGCAGGTGATTGGAGGATTGGTGGTCGGGGCGCTGGTTGCGGCGGGGCCGGTGATGGTTGTTGCTGCCACTTTTGCTAATGCTACTTATGAGAGGTTGCCACTGGAAGATGAACAAGGAGAAGAGGAAAACATGGAACAAGAGGTTAATAATAATAATACTCGGAACATTATTAACAACAATGATGCTGGTGCTGGTGGTTCGGGTTCGGTTTCTCTGTCTGTTTCTGGTTCAGCTAGTGGAAGTGGTGCAACATCTCATGGATTAGGAGAATTCAATTTGAATCCAAATTTGATGAATGGTGGTGGGCACAATGTGGGACATGGACACGGGCACGGACACGGACATGATATGTTTTGGCGTCCACCTCCTCCACCACCTTATTGA 969 0.5201 MANRWWDGRQPEANPNPVEGSNQTGSNRIVSRREQEFMESNTNNNSNSNITPTMSNNSTVNVNGEDNDRDGDDQNTGSGRRPRGRPPGSKNKPKPPVVITKETPNALRSHILEISSGSDVAESISTFANRRHRGVSVLSGTGVVTNVTLRQPTAPGGIIALQGRYDILSLSGAFLPPPSPPEATGLTVYLAGVQGQVIGGLVVGALVAAGPVMVVAATFANATYERLPLEDEQGEEENMEQEVNNNNTRNIINNNDAGAGGSGSVSLSVSGSASGSGATSHGLGEFNLNPNLMNGGGHNVGHGHGHGHGHDMFWRPPPPPPY 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01961 322 MobiDBLite consensus disorder prediction 65 79 - -
Vivi7g01961 322 CDD DUF296 108 219 IPR005175 -
Vivi7g01961 322 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 46 315 IPR014476 GO:0003680
Vivi7g01961 322 MobiDBLite consensus disorder prediction 15 64 - -
Vivi7g01961 322 Pfam Plants and Prokaryotes Conserved (PCC) domain 108 220 IPR005175 -
Vivi7g01961 322 FunFam AT-hook motif nuclear-localized protein 107 235 - -
Vivi7g01961 322 MobiDBLite consensus disorder prediction 1 100 - -
Vivi7g01961 322 Gene3D - 107 244 - -
Vivi7g01961 322 MobiDBLite consensus disorder prediction 248 282 - -
Vivi7g01961 322 MobiDBLite consensus disorder prediction 294 322 - -
Vivi7g01961 322 SUPERFAMILY AF0104/ALDC/Ptd012-like 105 232 - -
Vivi7g01961 322 ProSiteProfiles PPC domain profile profile. 104 241 IPR005175 -
Vivi7g01961 322 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01961 Vivi-Chr7 79931640 79933338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01961 1 233 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 54.661 9.42e-68 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01961 - - cam:101507777 347.051