Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01948 ATGGGAGACGCTATTGATTTGTCTGGTGATGGAGGAGTCATCAAAACCATTTTGAGGAAAAGCAAGTCAGATGCTGTGGCTCCAACTGAAGATTTTCCTGTTGTTGATGTACACTATGAAGGCACACTCGCTGATACCGGCGAAGTCTTTGACACTACACATGAAGACAACACTATATTCTCCTTTGAACTTGGAAAGGGTAGTGTTATCAAGGCTTGGGACATTGCAGTCAAAACCATGAAGGTTGGAGAAGTTGCAAAAATAACATGCAAGCCAGATTATGCATATGGTAGCGCAGGATCTCCGCCAGATATCCCTCCAGATGCAACACTTGTTTTTGAAGTTGAGCTAGTTGCGTGTAGGCCACGGAAGGGCTCAACTACTGGAAGTGTTTCAGAGGAGAGGGCTAGGCTAGAGGAGCTGAAAAAGCAGAGAGAGATTGCTGCTGCTGCAAAAGAGGAGGATAAGAAGAAGAGAGAAGAACAAAAAGCGGCAGCTGCAGCTCGTGTGCAAGCCAAGCTTGAAGCCAAGAAAGGTCAAGGAAAGGGTAAAGGGAAAGGAAAGTAG 567 0.4586 MGDAIDLSGDGGVIKTILRKSKSDAVAPTEDFPVVDVHYEGTLADTGEVFDTTHEDNTIFSFELGKGSVIKAWDIAVKTMKVGEVAKITCKPDYAYGSAGSPPDIPPDATLVFEVELVACRPRKGSTTGSVSEERARLEELKKQREIAAAAKEEDKKKREEQKAAAAARVQAKLEAKKGQGKGKGKGK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01948 188 Coils Coil 131 177 - -
Vivi7g01948 188 SUPERFAMILY FKBP-like 9 118 - -
Vivi7g01948 188 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32 121 IPR001179 GO:0003755
Vivi7g01948 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 11 181 - -
Vivi7g01948 188 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 34 118 IPR001179 GO:0003755
Vivi7g01948 188 Gene3D - 3 120 IPR046357 GO:0003755
Vivi7g01948 188 MobiDBLite consensus disorder prediction 148 166 - -
Vivi7g01948 188 FunFam Peptidylprolyl isomerase 1 120 - -
Vivi7g01948 188 MobiDBLite consensus disorder prediction 148 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01948 Vivi-Chr7 79690825 79694251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01948 4 146 Calmodulin-binding Proteins AT5G48570 35.135 1.08e-12 63.9