Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01925 ATGGCAATTGGATTCATGGAAGTACATCTTCTCAAAGCAAAAGGCCTCAATACCACTTGTTTCTTTGGTGGAATGGAAGATCCCTATGTTTTGATACAATATGAAGGCCAAGAACATAAGAGTAGTGTCGCCAAAGGTAGAGGAAGAAACCATGTATGGGATGAGAAATTTATGTTCAAAGTAGAGAATTTTGGATCAAAAGATAAACACAAAATCATTCTCAAGATAATGGACAAAGACACCTTTTCAGCTGATGACTTCATGGGACAAACCATGATCTATGTGAAGGATTTGTTGACTCAAGGTGTAGAAAATGGAGTTTCTAAGCTACCACCTCTCAAGTATAGAGTTGTTCGAGCTGATGAATCTTATCATGGAGAAAATGATGTTGCCATTACTTTTACTCCCAAGGTGGAAGATGAACTTATTATTGAAGAAGACATAGGAGAATGGAAAGAAAGTAACTACTCCTATCTATCTTAG 483 0.3685 MAIGFMEVHLLKAKGLNTTCFFGGMEDPYVLIQYEGQEHKSSVAKGRGRNHVWDEKFMFKVENFGSKDKHKIILKIMDKDTFSADDFMGQTMIYVKDLLTQGVENGVSKLPPLKYRVVRADESYHGENDVAITFTPKVEDELIIEEDIGEWKESNYSYLS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01925 160 PANTHER C2 DOMAIN-CONTAINING 3 138 - -
Vivi7g01925 160 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Vivi7g01925 160 Pfam C2 domain 6 106 IPR000008 -
Vivi7g01925 160 SMART C2_3c 5 107 IPR000008 -
Vivi7g01925 160 Gene3D C2 domain 2 137 IPR035892 -
Vivi7g01925 160 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 126 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01925 Vivi-Chr7 79258785 79260037 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01925 3 106 C2H2 Transcription Factor Family AT4G21160 36.190 3.44e-11 58.2