Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01914 ATGACAATTGGGTTCATGGAAGTTGTTCTTCTCAAAGCAAAGGGTCTCCAAGAATCTGATATCTTCGCTCGCATGGATCCGTATGTTGTGTTACAATACAAAAATCAAGAGAAAAAGAGCAGCGTAGTTCATGAGGGTGGTAGCAATCTTGAATGGAATGAGAAATTTATATTCAGAGTGGAATACCCTGGATCGGGTGACCAATACAAGCTCAACCTTAAAATCATGGACAGAGATGTTTTTACTGCAGATGATTTTGTTGGCCAGGCCATAATCTATGTAAAAGATTTATTAGCGGAAGGAACAGAGAAAGGATCATCTGTGCTTCGTCCTCGCAAGTATAGTGTGGTTCGAGCGGACAATTCTTATTGCGGTGAGATCGAAGTTGGTATAAATTTCACTAGAAAGGAAGAGGAATGTAGTGACGGCGAGTTTGGAGGATGGAAGGATAGTGAGTATTAA 462 0.4069 MTIGFMEVVLLKAKGLQESDIFARMDPYVVLQYKNQEKKSSVVHEGGSNLEWNEKFIFRVEYPGSGDQYKLNLKIMDRDVFTADDFVGQAIIYVKDLLAEGTEKGSSVLRPRKYSVVRADNSYCGEIEVGINFTRKEEECSDGEFGGWKDSEY 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01914 153 Gene3D C2 domain 3 135 IPR035892 -
Vivi7g01914 153 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 136 IPR035892 -
Vivi7g01914 153 Pfam C2 domain 6 101 IPR000008 -
Vivi7g01914 153 PANTHER C2 DOMAIN-CONTAINING 3 137 - -
Vivi7g01914 153 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Vivi7g01914 153 SMART C2_3c 5 106 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01914 Vivi-Chr7 79031848 79033609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01914 3 105 C2H2 Transcription Factor Family AT4G21160 31.068 7.43e-10 54.3