Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01911 ATGGGTTGTTGCTTTAGTGCCAGAATCAAAGCTGAAAGCCCTCCACGCAATGGTTCGAGTTCGAAGGATAGTGGCAAAGAAAATGGCTTGAGTGGGCAGAGCAGCGGCAAGGCCTCTGCTCCGCCTACTGCGCCTCCGACTCCGCGGACTCCGCGGACGCAGGGCGAGATCTTGAAGTCTTCTAATATGAAGAGCTTCAGTTTAAGTGAACTGAAAACTGCTACGAGAAACTTTCGTCCTGATAGTGTGGTTGGTGAAGGTGGATTTGGAGCTGTATTCAAGGGTTGGATTGATGAGCAATCGCTTACACCGGTTAGACCGGGGACTGGAGTTGTCATTGCGGTCAAGAGGCTTAATCAAGAAGGTTTGCAAGGACATAGTGAATGGTTGACAGAAATCAATTACTTGGGTCAGCTGCATCATCCTAATCTTGTGAAACTCATTGGTTACTGCCTCGAGGACGAACATCGGCTTTTGGTTTACGAGTTTTTGACTAAAGGAAGTTTGGATAATCATTTATTTAGAAGAGCTTCTTACTTTCAACCGCTTTCTTGGACGATCCGAATGAAGGTTGCTCTTGATGCTGCTAAGGGTCTTGCATATCTTCACAGCGACGAAGCAAAAGTGATATACCGAGACTTTAAAACTGCAAATATATTGCTCGACTCGTCTTATAATGCAAAACTTTCCGATTTCGGTCTGGCAAAGGACGGTCCCGCAGGTGATAAGAGTCATGTCTCTACAAGGGTGATGGGCACATATGGCTATGCCGCTCCCGAATATATGGCCACAGGACATTTGACCAAAAAGAGTGATGTATACAGCTTCGGCGTAGTACTCCTTGAAATCATGTCAGGCAAACGTGCACTTGACAACAACAGGCCATCTGGGGAACACAATTTAATCGAATGGGCCAAACCTTACCTCAACAGCAAACGACGAATCTTCCAAGTTATGGACGCTCGCATCGAAGGCCAATACACGGTGCGTCAAGCAATGAAAGTAGCCAACCTCGCTATTCAATGCCTATCCGTTGAACCAAGGTTCAGACCGAAAATGGACGAGGTTGTTATAGCATTAGAGGAACTTCAGGGTTCCTCTGATGTTACGGCCGGAGAAGCGGGAACCTCTCGAGATCATCAAAATGTTAGAAGGAGTGGTCATAGCTCAAGGAGCAATGGTCCTAGACAACATAGAAGTAGTAAACAAAGTGAGACAATAATCAGGGAAAAATGA 1236 0.4612 MGCCFSARIKAESPPRNGSSSKDSGKENGLSGQSSGKASAPPTAPPTPRTPRTQGEILKSSNMKSFSLSELKTATRNFRPDSVVGEGGFGAVFKGWIDEQSLTPVRPGTGVVIAVKRLNQEGLQGHSEWLTEINYLGQLHHPNLVKLIGYCLEDEHRLLVYEFLTKGSLDNHLFRRASYFQPLSWTIRMKVALDAAKGLAYLHSDEAKVIYRDFKTANILLDSSYNAKLSDFGLAKDGPAGDKSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYSFGVVLLEIMSGKRALDNNRPSGEHNLIEWAKPYLNSKRRIFQVMDARIEGQYTVRQAMKVANLAIQCLSVEPRFRPKMDEVVIALEELQGSSDVTAGEAGTSRDHQNVRRSGHSSRSNGPRQHRSSKQSETIIREK 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01911 411 SUPERFAMILY Protein kinase-like (PK-like) 48 357 IPR011009 -
Vivi7g01911 411 Gene3D Transferase(Phosphotransferase) domain 1 164 385 - -
Vivi7g01911 411 FunFam Serine/threonine-protein kinase BIK1 45 163 - -
Vivi7g01911 411 MobiDBLite consensus disorder prediction 368 411 - -
Vivi7g01911 411 CDD STKc_IRAK 84 363 - -
Vivi7g01911 411 Pfam Protein tyrosine and serine/threonine kinase 82 358 IPR001245 GO:0004672|GO:0006468
Vivi7g01911 411 MobiDBLite consensus disorder prediction 387 401 - -
Vivi7g01911 411 Gene3D Phosphorylase Kinase; domain 1 53 163 - -
Vivi7g01911 411 ProSiteProfiles Protein kinase domain profile. 78 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01911 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Vivi7g01911 411 FunFam Probable serine/threonine-protein kinase PBL8 164 380 - -
Vivi7g01911 411 ProSitePatterns Protein kinases ATP-binding region signature. 84 116 IPR017441 GO:0005524
Vivi7g01911 411 PANTHER OS01G0588500 PROTEIN-RELATED 37 364 - -
Vivi7g01911 411 MobiDBLite consensus disorder prediction 13 40 - -
Vivi7g01911 411 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01911 Vivi-Chr7 79003580 79006125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01911 1 368 Glycoside Hydrolase AT3G07070 45.383 2.34e-108 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vivi7g01911 PK_Tyr_Ser-Thr 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01911 - - gmx:100775335 676.781