Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01891 ATGGAGAATATTAGAGGTATGAGAAAAGGTGCATGGACACATGAGGAAGACAAGCTACTCAAGGCTTGCATTAACAAGTATGGTGAAGGAAAATGGCATTTAGTTCCTCAAAGAGCAGGATTGAATAGGTGCCGAAAAAGTTGTAGATTAAGGTGGTTAAATTATTTAAGCCCCGAGATCAACAGAGAAAGCTTTAGTGAAGATGAAGTTGATATGATCCTAAGAATGCACAAACTTCTGGGGAATAGATGGGCATTGATTGCTGCAAGGCTTCCGGGTAGAACAGCTAATGATGTGAAGAATTATTGGCACACACACTTGCGCAAGAAGATGATTTCAAGAAAAACAGAAGACAAGAAAGAAAAAGAGAAACCTAATGAAACCATGAAAGCTCATGAAATTATTAAACCTCAACCTCGAACTTTTTCATCCCATTCACGTTGGTTGAATGGGAAAAATAATAATTTTGTGAAACAAATAGTGACGGTTTCGAATAAAGATGCTTCTACTGCAAATGATGGTGGTAACACAGAGACTATGGCGACAAATCAAAATGGTAGAGATTGTGTTGATGGCTTAGAACCAAGTCTAGGTAATGCCTCGATACCGAGTGCAACATGGTGGGATAGCTTGTTGAACTTGGGAGAGCAAGAATGTAGTGAGAAAAATGGAGCATGCTCTTTATTACCAGACGAAAATTTTGCTCTAGAGTTTCCAAAAGTGGATGATTTCTTTTGGGATTGCATGCTTTGTGATTTCGGTTCTGTTTGGGATATTTAG 780 0.3859 MENIRGMRKGAWTHEEDKLLKACINKYGEGKWHLVPQRAGLNRCRKSCRLRWLNYLSPEINRESFSEDEVDMILRMHKLLGNRWALIAARLPGRTANDVKNYWHTHLRKKMISRKTEDKKEKEKPNETMKAHEIIKPQPRTFSSHSRWLNGKNNNFVKQIVTVSNKDASTANDGGNTETMATNQNGRDCVDGLEPSLGNASIPSATWWDSLLNLGEQECSEKNGACSLLPDENFALEFPKVDDFFWDCMLCDFGSVWDI 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01891 259 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 181 - -
Vivi7g01891 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 60 IPR017930 -
Vivi7g01891 259 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Vivi7g01891 259 Gene3D - 2 62 - -
Vivi7g01891 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 111 IPR017930 -
Vivi7g01891 259 CDD SANT 64 107 IPR001005 -
Vivi7g01891 259 SMART sant 8 58 IPR001005 -
Vivi7g01891 259 SMART sant 61 109 IPR001005 -
Vivi7g01891 259 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
Vivi7g01891 259 FunFam Myb transcription factor 9 61 - -
Vivi7g01891 259 CDD SANT 11 56 IPR001005 -
Vivi7g01891 259 Gene3D - 63 138 - -
Vivi7g01891 259 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Vivi7g01891 259 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Vivi7g01891 259 Pfam Myb-like DNA-binding domain 62 107 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01891 Vivi-Chr7 78683768 78684940 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01891 2 167 MYB Transcription Factor Family AT1G66370 53.804 6.93e-62 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi7g01891 Myb_DNA-binding 1.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01891 - K16166 mtr:11424892 330.487