Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01834 ATGTCTAGTATCTCTAGTATCTCGTCCAACCGTGTAATGGAGCCATGCAACAAAGATTCTGAAGAGAGCGTTGATTCCACAAAACATGTTAATAATTCACGCTCATTTGATTGTTGCGTCTGTCTTCAACTCTTGACCATTCCCGTTTTCCAGTGTAAAAATGGTCATATTGTTTGCTCAACTTGCTGTGATCAACTCGGGAACAAGTGTGACAAATGCTCGAAACAAATTAGCTTAACACGTTGTAAAGAATATGAATATCTATTGCAATCTATCAAGTTGCCATGTCCGAATGAAAAATATGGTTGCAGGGAGACAATTCGTTATCGTTACAGTGGAATGAGGAAGCATGGAGAAGAATGCATCTATGTGCCATGTTATTGTCCCCTTTCAGGTTGTGATTTGGTTGCCTCATTAGAAGTGTTGTCCAACCATTTCAACTGTGAACACTGCGATTCTCTAATCGAATTTTCTTATGATCACCCCTTCATTGTCTCCTTGAAGTCTAATGACGTAACCGTGGTTCTCCAAGAGGAACACGATGGCAGACTATTTACGCTCAATAATAGTACTATCACGAGGATGGGGAATGCAGTCAATATTAGCTGCATCGATACTGACTCTTCTTCTGCGTCTGGATATAGTTATGATATATCAGCTAAGTCTAAGTTTGGCAATCTGCTGAAGTTACATTCTTTTCCTAAGAATGTCCAACAGGCTACTTCACCAATTCATTCATCACCGTTCCTTCTGATTCCATTTGGTTATTTTGGTTCTTCTGAACCTCTCAAGCTAGAAATTTGCATAACCCCCAAGTGA 819 0.398 MSSISSISSNRVMEPCNKDSEESVDSTKHVNNSRSFDCCVCLQLLTIPVFQCKNGHIVCSTCCDQLGNKCDKCSKQISLTRCKEYEYLLQSIKLPCPNEKYGCRETIRYRYSGMRKHGEECIYVPCYCPLSGCDLVASLEVLSNHFNCEHCDSLIEFSYDHPFIVSLKSNDVTVVLQEEHDGRLFTLNNSTITRMGNAVNISCIDTDSSSASGYSYDISAKSKFGNLLKLHSFPKNVQQATSPIHSSPFLLIPFGYFGSSEPLKLEICITPK 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01834 272 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 146 IPR013083 -
Vivi7g01834 272 MobiDBLite consensus disorder prediction 1 23 - -
Vivi7g01834 272 Pfam Seven in absentia protein family 84 246 IPR018121 GO:0005737|GO:0006511|GO:0007275
Vivi7g01834 272 SUPERFAMILY TRAF domain-like 91 270 - -
Vivi7g01834 272 ProSiteProfiles Zinc finger SIAH-type profile. 91 151 IPR013010 GO:0008270
Vivi7g01834 272 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 29 270 IPR044286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01834 Vivi-Chr7 77327352 77329563 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01834 36 272 C3H Transcription Factor Family AT2G41980 25.100 9.24e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01834 K04506 - mtr:11432566 308.531