Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01813 ATGAACACAAGAGGCAATGCTGAAGCAGAACAGTTACTGGAAATCGGAGAAGAGCTCTTACAGAAACGAGATCTAAAAGGTTCAAGAGAAATAGCGGTTCTAGCTCAAGAAGCCGACCCTCTTCTAGAAGGTTCCGACCAGATAATAGCAATAGTTGATGTTCTCGAAGCAGCTGAGAAGCCTCTAAATCTCAACAACAACAACAACCTCGATTGGTACGCTATTCTTCAAATCGATCGAAATTCGTTGCCAGATCTGAATCTCATAAGGAAACAGTTTCGCACTCTTGCTCTTCTTCTTCATCCTGATAAGAACCGTTTCTCATTTGCAGAACTAGCATTCAAGCTCGTTTCTGATGCTTGGGCCGTTTTGTCTGATCCTGCTCAAAAGGCTCGGTATGATAAGGGTTTTGAACTTGGGGTTAAGGGTTTGGAAAATGGAACGGTTAGTTTTTGGACTGTTTGTCCTTATTGTTACCGTTTGTATGAGTATTCTAGGGTTTATGAGGGTTGTTGTTTGATGTGTCAGAATTGTAACAAATCTTTTCACGGTGTTTCGGTTCAGGCCCTTCCGCCAATTGTTCCCGGCGAAGAAGCTTACTATGTTTCTTGGGGAATGTTTCCTATGGGTTTTGTTTTCGAGAGTCTAGAAAATGGCGGGGGTGATGATGATTCTGCTACGCCAAAGCCATAG 693 0.4286 MNTRGNAEAEQLLEIGEELLQKRDLKGSREIAVLAQEADPLLEGSDQIIAIVDVLEAAEKPLNLNNNNNLDWYAILQIDRNSLPDLNLIRKQFRTLALLLHPDKNRFSFAELAFKLVSDAWAVLSDPAQKARYDKGFELGVKGLENGTVSFWTVCPYCYRLYEYSRVYEGCCLMCQNCNKSFHGVSVQALPPIVPGEEAYYVSWGMFPMGFVFESLENGGGDDDSATPKP 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01813 230 ProSiteProfiles dnaJ domain profile. 71 137 IPR001623 -
Vivi7g01813 230 Pfam DnaJ domain 71 134 IPR001623 -
Vivi7g01813 230 ProSitePatterns Nt-dnaJ domain signature. 114 133 IPR018253 -
Vivi7g01813 230 Gene3D DnaJ domain 57 149 IPR036869 -
Vivi7g01813 230 PRINTS DnaJ domain signature 109 129 IPR001623 -
Vivi7g01813 230 PRINTS DnaJ domain signature 129 148 IPR001623 -
Vivi7g01813 230 PRINTS DnaJ domain signature 93 108 IPR001623 -
Vivi7g01813 230 SUPERFAMILY Chaperone J-domain 67 148 IPR036869 -
Vivi7g01813 230 CDD DnaJ 71 126 IPR001623 -
Vivi7g01813 230 SMART dnaj_3 70 129 IPR001623 -
Vivi7g01813 230 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01813 Vivi-Chr7 77018507 77019497 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01813 2 212 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 50.000 1.79e-75 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01813 - - psat:127118345 397.127