Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01794 ATGAAACAAAGCATAGATCTTGAAGTGGAAGCTTATGCAGAATATGAATCTGAAGTTACAAGCCAAGTTGGTTCCAATGTATCAACTCAAGAAGCCTCTTCCAACAACATCACAAACCCTAACTACAATAATATATCTCTTGACTTAACTCTCAAATTCAACAACAATGAGATACTAACAACAACTAGAGACTCAAATTCAATAGGATTCTCACTCTCAAGCACTTCTGAGAGCAGCAATGAACCTGCATCAGCAACTGTTCCAAGAGTTTTCTCTTGCAATTACTGTCAGAGAAAGTTTTTCAGCTCACAAGCTCTTGGTGGACACCAAAATGCACACAAAAGAGAGAGAACAATAGCGAAAAGAGCTATGAGAATGGGAATTTTCTCTGATAGGTATAATGCTAGTTTAGCATCTCTACCTTTGCATGGTTCTTTTAGGTCATTAGGGATAAAAACACACTCCTCAATGCACTATGGTTTTTCAGTACCAACAACAATTAGGCCTCATAATCATCACGAGACGAAAATCAATACGAGATTCGAACAAGGGTGCGTTGGATTTCCGATATTCTTGGAAGATGAGGAGTCGGAGTTGTTGTGGCCGGGTAGTTTTCGAAAGGCGTCGGAGACGGCTGATGGAGAACAGAATTTCATACTCACTGAGGTGAATCCATGTGTGGACATAGAAAAATCTACACCAGATTTGACATTGAAACTTTGA 723 0.3942 MKQSIDLEVEAYAEYESEVTSQVGSNVSTQEASSNNITNPNYNNISLDLTLKFNNNEILTTTRDSNSIGFSLSSTSESSNEPASATVPRVFSCNYCQRKFFSSQALGGHQNAHKRERTIAKRAMRMGIFSDRYNASLASLPLHGSFRSLGIKTHSSMHYGFSVPTTIRPHNHHETKINTRFEQGCVGFPIFLEDEESELLWPGSFRKASETADGEQNFILTEVNPCVDIEKSTPDLTLKL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01794 240 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 118 IPR013087 -
Vivi7g01794 240 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 13 167 IPR044246 GO:0009788
Vivi7g01794 240 SUPERFAMILY beta-beta-alpha zinc fingers 89 118 IPR036236 -
Vivi7g01794 240 ProSitePatterns Zinc finger C2H2 type domain signature. 93 113 IPR013087 -
Vivi7g01794 240 Gene3D Classic Zinc Finger 70 136 - -
Vivi7g01794 240 FunFam Zinc finger protein 2 70 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01794 Vivi-Chr7 76864902 76866355 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01794 73 240 C2H2 Transcription Factor Family AT1G66140 47.500 1.32e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vivi7g01794 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01794 - - vvo:131617518 453.366