Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01785 ATGGAAGCAACACGTGAAACTGAGATACCCACAAACGGAGAAGATCAAAGCTGGTATCTTTTCCACCACCAAGAACAACCCGCCATGTCTTTCTCTCTCACCGACGGTTGCAAGAAGAGAAAACGGTGGCCAAAGATTTTCCGGCTACAATCTTTCGCAGACCCTGGTTGTCCGATTTCACCTTCAGGTCCTTTCCGTGATAACGTTCGGTTCTTTCTTCAAGAAGCTGGTGAGCCTGAAGATTACACGGTTTTGGGTAATCCTCTTTGGTCCACGTTTCTCATTCATGATAAGAGTAACCTCATGGCTCCGTTCTATACTCTTGAAGAAGAAGTTTACAACTCTTCTCATCCGTTCTGTGATCATTGCCGTTGCGTAGGTTGGAGTGGCCATTTTGTATCGAAGAGAAGGTACCATTTCATAATTCCGATGGACAATGCGTGGCATAAACCGTTAAACGAAGAAGCTCTAGATAATCAAAGTCATCTGTTACATGGTGTGATTCATTGCAATGGTTATGGCCATTTGGTGTGTCTTAATGGCATTGAAGGTGGTTCCAAATATCTCAGTGGCAGAGAGATCATGGATCTATGGGACAGAATTTGTAGCAATCTTAGAGCAAGGCAAATTGCAGTAGAAGATGCTTCAAGGAAAAGGTCGATGGATCTTCGATTATTACATGGAGTTGCTTATGGTCACTCTTGGTTTGGTAGATGGGGCTACAGGTTTTGTCGCGGAAGCTTTGGCGCGACAGAACAAAACTACTATGAAGCAATCGAAACTCTTGGTTCGTTAGTTCTTGATGAGATTGTAAGGGATTTGAGTAAGACAAAGTACCATAAAGATATCAAACAGATGATTCGTTTATATAGAGATATGAGTGAAACTCAAATCACAACCATTAGAGAGCTTCTCAGATTCATGCTCACTGTCAAGTCTCGTCGACCCGTGTCAAAGATAACAATCACTTGTTCTTCTGGTTCTAATTCTGCTTCTGCTTCACCTTCTTATTCTACTACAACATTTCTGTCAAGAAATTCAACAAAACAAGCACTTTCATGTAGTAGATCAGATTCTATGAGTAAGGAAAAATCAGCAAGGTATAAGAAATTCAGCACAGCAGTGGTGAATATGGATAGTAGATGGCCAACAAGGAGACTAGAGTTTGCAGCTCAAGTGATTGTGGATGCGTTGAAAGAAGACAAAGCTACGAAATCAGGATCTAGTGGAATGACAAGACAAGATGTGAGGGATGCAGCTAGGCTTCACATTGGTGACACAGGTTTACTTGATTATGTGCTGAAATCATTGAACAATGTGATTGTTGGAAACTATGTCGTTCGTCGCATGGTTAACCCTTCATCAAGGATCCTTGAGTATACCATTCATGAGCTTGGGAAAGGGTTCAAGGCACCTGAAGCAGAACATGGAGTAATGACAGTTGCCGATAATCCTCAAGTAGATTCATCAGCAGCAGCAGCAGCCTCATCTTTAACTCCTGGTAATGATGTTTACAGTGATGTAGTTTACCTCTACAAGAACGTGCTGTTGGGCTATCCAGAATCAGAGGCGGTGGAATTAGCAGTTCAAACAATTCTCGACTGCAGACACTTTGTGAAAGAATGGGAATTGAGAGATGAAATGGAACAGGTTCTGACATTTATTTGCCGTCTGAAACCGAATTTCGTCGAGAATAAAGCTGATTTAAAAGGGCCAACTTGTGGTGAGATTGTAACTGTTCCATTGCATGCCACAGTTAGGGACTTGAAACAAGCTGCTGAGGCTGCTTTAAGGGACACTTATTGCATAGCTGAGAGACTGATAGTGACAGATATAAAAGAACTGATGGGTGTAGACGATAGCGAAGTGATTTTCGGGTTGATTGAATCAGGTGTGAAGCTTTGTATTAGAGGAATTAGTATAGACTTGTGTACACCATTGAAATATCAAGGAGGGTCTGATAACTGGAAGGTGAGGTGTGAGTGTGGAGCACAGGATGATGATGGTGAGAGAATGGTTTCTTGTGATATTTGTGAGGTGTGGCAGCATACAAGATGTTGTGGAATAGATGATACTGAGACTGTTCCACCATTGTTTGTGTGTACTGGATGCTGTGATTCACTTGTGCCACCAAGGATTGAATCTATCAGCTATGGTATGGTGGATTGTGCTGATGCATTTCTTGTTTCACCTGAGGCTACTCATTTGCTTGAGTATGGTTATGGGTACTGA 2232 0.4207 MEATRETEIPTNGEDQSWYLFHHQEQPAMSFSLTDGCKKRKRWPKIFRLQSFADPGCPISPSGPFRDNVRFFLQEAGEPEDYTVLGNPLWSTFLIHDKSNLMAPFYTLEEEVYNSSHPFCDHCRCVGWSGHFVSKRRYHFIIPMDNAWHKPLNEEALDNQSHLLHGVIHCNGYGHLVCLNGIEGGSKYLSGREIMDLWDRICSNLRARQIAVEDASRKRSMDLRLLHGVAYGHSWFGRWGYRFCRGSFGATEQNYYEAIETLGSLVLDEIVRDLSKTKYHKDIKQMIRLYRDMSETQITTIRELLRFMLTVKSRRPVSKITITCSSGSNSASASPSYSTTTFLSRNSTKQALSCSRSDSMSKEKSARYKKFSTAVVNMDSRWPTRRLEFAAQVIVDALKEDKATKSGSSGMTRQDVRDAARLHIGDTGLLDYVLKSLNNVIVGNYVVRRMVNPSSRILEYTIHELGKGFKAPEAEHGVMTVADNPQVDSSAAAAASSLTPGNDVYSDVVYLYKNVLLGYPESEAVELAVQTILDCRHFVKEWELRDEMEQVLTFICRLKPNFVENKADLKGPTCGEIVTVPLHATVRDLKQAAEAALRDTYCIAERLIVTDIKELMGVDDSEVIFGLIESGVKLCIRGISIDLCTPLKYQGGSDNWKVRCECGAQDDDGERMVSCDICEVWQHTRCCGIDDTETVPPLFVCTGCCDSLVPPRIESISYGMVDCADAFLVSPEATHLLEYGYGY 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01785 743 SMART PHD_3 659 705 IPR001965 -
Vivi7g01785 743 SUPERFAMILY FYVE/PHD zinc finger 652 711 IPR011011 -
Vivi7g01785 743 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 647 708 IPR013083 -
Vivi7g01785 743 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 37 713 - -
Vivi7g01785 743 ProSitePatterns Zinc finger PHD-type signature. 660 704 IPR019786 -
Vivi7g01785 743 CDD PHD_MMD1_like 660 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01785 Vivi-Chr7 76748405 76751044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01785 38 710 PHD Transcription Factor Family AT5G22260 32.448 3.58e-120 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01785 K26271 - gmx:100797388 1063.14